![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009784444.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
WRKY |
Protein Properties |
Length: 507aa MW: 56092.4 Da PI: 8.1565 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009784444.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Nsy&pid=XP_009784444.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93.6 | 1.4e-29 | 245 | 302 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+DgynWrKYGqK v+g+ef+rsYY+Cts++C +kk+vers+ d+++++i+Y +H+h+k
XP_009784444.1 245 EDGYNWRKYGQKLVRGNEFTRSYYKCTSPNCLAKKQVERSH-DGHITNIHYITKHEHPK 302
7****************************************.***************85 PP
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2 | WRKY | 104 | 8.3e-33 | 423 | 480 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
Dgy+WrKYGqK vkg+++prsYYrC+sagCp+kk+ver+++dpk+v++ Yeg+H+h+
XP_009784444.1 423 TDGYRWRKYGQKLVKGNPNPRSYYRCSSAGCPAKKHVERASHDPKLVVTAYEGQHDHD 480
7********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 507 aa
Download sequence Send
to blast |
MGTHKEDVTD EVSSEKLQRK QDLDTVTYRS ESKEKGICES MSAEVISGEL QKRVSPDALE 60 KSSQSNQDEN ALSTTCQEVS GEVKPKKSVI EGIEKFQQKP DPDTVTNRSE SKEKGTCDSV 120 SAEVVSDELL KGLSPNSLAK ASESSRVSVL PKKEPYIKSC ESDPPVKDRN VSLVPGKASD 180 SSQHIQREKM EVVVSQPNQE QVTYSTTSEK ALDKLQPRRN PDTSAQALPS DQEITPFGAP 240 EKPSEDGYNW RKYGQKLVRG NEFTRSYYKC TSPNCLAKKQ VERSHDGHIT NIHYITKHEH 300 PKPLNSPQIS HEFVVPMQMR QPDMPMGTPQ KAKGKKSIVI GQTCQSIEQS ESSLSTAIVP 360 AGDSATDTVL KPHKSGDEAD NSGGPDPKRQ KREVPRSDEI PPIKSHSEPQ HIVQTRSKVD 420 IVTDGYRWRK YGQKLVKGNP NPRSYYRCSS AGCPAKKHVE RASHDPKLVV TAYEGQHDHD 480 TPPSRTVMQN AAGADSNNTT RISGVRI
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975446 | 1e-176 | HG975446.1 Solanum pennellii chromosome ch07, complete genome. |