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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009781334.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
ERF |
Protein Properties |
Length: 414aa MW: 47130.2 Da PI: 4.8892 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009781334.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.4 | 4.1e-19 | 197 | 247 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge
XP_009781334.1 197 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 247
59******9.**********955...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 414 aa
Download sequence Send
to blast |
MATSEDYSKS TTAIREEMDC DKGRDFDDNT QQRRPVFEEA SISQRRFKKI KSPERPHHSQ 60 SSTSYSQQPL SQSSVPYNNP ISPPPPSPSK LVFPFSFDGT QQSIENLYQM RPNTTPLFPP 120 QNQNQQQMIS FSPQQCPYPP YFAGELGQSQ NQQQLLQYWN ETLNLSPRGR MMMMSRLGQD 180 SKGLFRPQLQ PINTTKLYRG VRQRHWGKWV AEIRLPRNRT RLWLGTFDTA EDAAMAYDRE 240 AFKLRGENAK LNFPELFLGK DREGPSIETV ESTHTKQPDQ ESESLQLEPL NIELLPPPPP 300 LPPPPPEVDN QDEDSGMGSS EVTACDEVQG VSLQSTELVW GENEMAEAWF NAIPAGWGPG 360 SPVWDDLDTN NSNFIFPPNF HFGNVHSHNS DPHNQHIHDN TDPSSPSCPM RPFF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975446 | 1e-110 | HG975446.1 Solanum pennellii chromosome ch07, complete genome. |