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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009780883.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
Trihelix |
Protein Properties |
Length: 319aa MW: 36443 Da PI: 6.0201 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009780883.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 29.2 | 2.4e-09 | 19 | 85 | 2 | 68 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68
Wt +e l+L++ ++++ + +++ + ++W++ +++ + g++rs +qCk++we + y k+k +e
XP_009780883.1 19 WTLHESLTLVNEMKSTQIECGNTLASFQKWQSTVQNCNSLGVNRSLNQCKKRWEFILENYNKVKPWE 85
****************************************************************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MERGDGGSLR TRSQAAPDWT LHESLTLVNE MKSTQIECGN TLASFQKWQS TVQNCNSLGV 60 NRSLNQCKKR WEFILENYNK VKPWETVYWT ASFDGVRKSE LGLPEQFDFE LFNAVGRYLS 120 LLHGEDGGGA ETDPDSDPET QQAQGNNAFL ELGHKRQRRR TKPRKYKMEE RLNPWRRILN 180 ENRKYEQSMV GIKHEASIET KVEAPSYEKS SLQIKREISS PEEKVEPPNL SMVNMVKAEQ 240 INVDNPEEMM AATLRENAEL ITAIIEGNPM DDRDCRLADL KNSEAGRVHL IRSQGNQLID 300 CLGKISDTLS QLCDTIHKK
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G31270.1 | 1e-47 | sequence-specific DNA binding transcription factors |