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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009776998.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
SBP |
Protein Properties |
Length: 366aa MW: 39311 Da PI: 7.9625 |
Description |
SBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009776998.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SBP | 134.4 | 3.7e-42 | 73 | 148 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76
+CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa hnerrrk+
XP_009776998.1 73 RCQVEGCQVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLACHNERRRKP 148
6*************************************************************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MNGQWNSVME LGSVSSPGSN SSSSDSLNGL NFGKKIYFEN VGGGSSPVTG AGNLPPASKR 60 GRGGLMQGGQ PPRCQVEGCQ VDLSDAKAYY SRHKVCGMHS KSPTVIVAGL EQRFCQQCSR 120 FHQLPEFDQG KRSCRRRLAC HNERRRKPPS GSLFSTHYGS LSSSIFENNS SKSGSFLLDF 180 SSHPHVNESS WPNTRASEQG WDHQSTASGK CLQRPWLNNS ESATSELVLQ GSATRTNYVP 240 SGECFSGVSD SSTGALSLLS NRSWGSRNPP SSLGANIDGI HTIQPSDSHG APTNHFSSPS 300 LRFKGNEASS SSHEMPSDLG LGQISQAADD QYCGELGIGQ QSGRQNMELD HSNGYHPSVQ 360 NVHWSL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC244580 | 1e-126 | AC244580.4 Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-40g6 map 10, complete sequence. |
GenBank | HG975522 | 1e-126 | HG975522.1 Solanum lycopersicum chromosome ch10, complete genome. |