 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009776483.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
GATA |
| Protein Properties |
Length: 354aa MW: 38722.1 Da PI: 4.6724 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009776483.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 49.9 | 4.4e-16 | 213 | 249 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg ++ Tp +Rrgp+g++tLCnaCGl+++ kg+
XP_009776483.1 213 CQHCGISEseTPAMRRGPSGPRTLCNACGLMWANKGM 249
*****99999***********************9996 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MEAANTRAIG FEEEYMNVAI RVDEYGGGGF NADDISGGCE SSGTEELQHV CSVPPLSACP 60
VVDSDGRVLA AMPMPSRRTS ELTISFEGQV YVFPAVTPDK VQAVLLLLEG SDMASYVPSS 120
HSLALETIKS VDNDAPTRPN ISRRIASLIR FREKRKERCF EKKVRYTCRK EVAQRMHRKN 180
GQFASLKDGE KTYAGNIDSG DSIPHPEPTL RRCQHCGISE SETPAMRRGP SGPRTLCNAC 240
GLMWANKGML RDITKGGRGT PFDKSEPRTP DIKLSTVAPE NSYQKQYQED MQEAAENFVD 300
NSPVGIGSSS ADIDEEQDNL DELANASGTE FEIPASFDEQ IGIDSHMGAD WPGT
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975440 | 3e-40 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
