PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009776476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ZF-HD | ||||||||
Protein Properties | Length: 946aa MW: 104175 Da PI: 6.1654 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 98.5 | 5.1e-31 | 711 | 766 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++rY eClkNhAas+Ggha+DGCgEfmps g egt+ alkC AC+CHRnFHR++ + XP_009776476.1 711 SIRYMECLKNHAASMGGHAIDGCGEFMPS-GGEGTPGALKCEACNCHRNFHRKKIIN 766 789*************************9.8899*******************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF14111 | 1.7E-6 | 209 | 288 | IPR025558 | Domain of unknown function DUF4283 |
Pfam | PF04770 | 1.1E-28 | 712 | 763 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 1.3E-28 | 713 | 763 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 7.0E-20 | 713 | 764 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 26.382 | 714 | 763 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 946 aa Download sequence Send to blast |
MKPDNHTAKV EGRDETLGIM ELDKNEHIGG GNEYGSKESE AAPKNTHILE DGLYISDSVD 60 CVPEATHSDS AERVASPVNC STATSEIQAS AETSCSGSSG LSFASDGIAG GIPSVMDDSS 120 SMCSTDSMSF RGTYSNHNIQ KLYGRGWKYG SKSTSNAADW ASEKLNQPLD ALPIGEHHED 180 RKSRPPIQVQ YSTYRGRQAV TFPENYWESL VPDCKLTLIG NFFQRKPRMK EIRADFIAKN 240 PLKGQVKITH YTSQQVSLDF TNEADYDTVL SKKTLTVAVM QISWWSRDIH HEVGKQEWKA 300 MDKERDVKPG IMEQQKTELD ELIGGETEYK IDAPEAVLET PDILGEVSDV SNSLHIVPEV 360 AHPDFRDNDA SPVNCDTDTS KMHPSIGITC CQLSGISAPQ NMIDGTSPYV MNVNSSKCST 420 YSILSIVTTG LSSNDKDQSK SIRDVADSAS KAHSQPLDDL PEARQQMLKK DVAVSHQSEL 480 TESDRERHSS EIPSVSSPPR SPPRSIGSVI QLMSKLKVSV TNDPNSVKRS TSDNSNLTQK 540 SVPLFNSAEN AVLLSVDPHK SIEPKAIEKP LVRSISITTE NFPSNQVTAS ATAEMPMPLL 600 PTLPLLAHSV SPAAQLCADP PTAIDTYVPQ SYPNGIVGSH IFGRSEQAGS GSIFPSPSQA 660 LHQHSLAQRH SQLNSYKVDK NAHLDQESNM IAGPTQLQSL LTTSVSDTTS SIRYMECLKN 720 HAASMGGHAI DGCGEFMPSG GEGTPGALKC EACNCHRNFH RKKIINHRQM AGIGSHIEPR 780 NNSNSRNIHK QSPISQQYQH NYSYSPSSVV NSSDSYPQLP LPISGQICLP QGLEKKEPSL 840 IRPSYSYEMV NHDTVQQWEY FWRDRSRNTS IDHPSLRNEN QNFDMFKPLN YRTSDNIPSE 900 FANEFPHLDI INNLRYDEHG KGRTLMPNSG FQNLSNGSYH LNGHFT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009776474.1 | 0.0 | PREDICTED: uncharacterized protein LOC104226233 isoform X2 | ||||
TrEMBL | A0A1U7WP70 | 0.0 | A0A1U7WP70_NICSY; uncharacterized protein LOC104226233 isoform X2 | ||||
STRING | XP_009776472.1 | 0.0 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02540.1 | 5e-23 | homeobox protein 21 |