PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009775199.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 499aa    MW: 56969.9 Da    PI: 4.3988
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009775199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.96.7e-52231492128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ppGfrFhPtdeelv +yLkkk+ +k++ l ++i+e+d+yk++P+dLp  +k+k+++++w+fFs+rd+ky++g r+nratk+gyWkatgkd+ +++
  XP_009775199.1  23 PPGFRFHPTDEELVLYYLKKKICRKRILL-DAIAETDVYKWDPEDLPdlSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWKATGKDRIITC 116
                     9*************************999.99**************96559999***************************************** PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kktLv+ykgrap ge+tdWvmhey++
  XP_009775199.1 117 -NSRAVGVKKTLVYYKGRAPVGERTDWVMHEYTM 149
                     .999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-5919172IPR003441NAC domain
PROSITE profilePS5100555.1222172IPR003441NAC domain
PfamPF023651.8E-2723148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MKMLELIDSD SFACFGSSKN AFPPGFRFHP TDEELVLYYL KKKICRKRIL LDAIAETDVY  60
KWDPEDLPDL SKLKTGDRQW FFFSPRDRKY PNGARSNRAT KHGYWKATGK DRIITCNSRA  120
VGVKKTLVYY KGRAPVGERT DWVMHEYTMD EEELKRCQNV HDYYALYKVF KKSGPGPKNN  180
EQYGAPFREE DWVDDECPSA KASVRPVDDE RPSAKASVRQ DTSAKHVNEA PSVDGGLEEL  240
LNNTADEAVL VEPLCADYDY ALEQLVYEED TESTLLDHSS REVNFPNHSA VIAPGCQHYH  300
VKESFDLTQS GTSQLQLHEA PEVTSAPVSW EQQRHVVEED FLEDYLEMND LLGPEPSIQN  360
FDNPELGVKN FDEAGPSGQN FDKPSGNFED LQFDYLDGLT EFDLYHDTPF LLDDIRTTDV  420
GQITEPYMNN FVNGAVNPVS TTYLSTFQNE MVNHQPMYLN NGEQISNQLW THDQRFNIYN  480
PSEANQLVVP PAISDDGIE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-472117216165NO APICAL MERISTEM PROTEIN
1ut4_B8e-472117216165NO APICAL MERISTEM PROTEIN
1ut7_A8e-472117216165NO APICAL MERISTEM PROTEIN
1ut7_B8e-472117216165NO APICAL MERISTEM PROTEIN
3swm_A9e-472117819174NAC domain-containing protein 19
3swm_B9e-472117819174NAC domain-containing protein 19
3swm_C9e-472117819174NAC domain-containing protein 19
3swm_D9e-472117819174NAC domain-containing protein 19
3swp_A9e-472117819174NAC domain-containing protein 19
3swp_B9e-472117819174NAC domain-containing protein 19
3swp_C9e-472117819174NAC domain-containing protein 19
3swp_D9e-472117819174NAC domain-containing protein 19
4dul_A8e-472117216165NAC domain-containing protein 19
4dul_B8e-472117216165NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775199.10.0PREDICTED: NAC domain-containing protein 74-like isoform X2
TrEMBLA0A1U7WKJ70.0A0A1U7WKJ7_NICSY; NAC domain-containing protein 74-like isoform X2
STRINGXP_009775198.10.0(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.12e-97NAC domain containing protein 17