PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_009774958.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 368aa MW: 41708.3 Da PI: 4.457

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009774958.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.6	1e-18	8	147	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknr.atksgyWkatgkd 89 GfrF+Ptd+e + +L + v+g++++ + + ++vd+y k ePw++ + + + e+++ y +F+++ kk++ + r +r + ++g+Wk+ k XP_009774958.1 8 EGFRFRPTDSEGL-TFLLRFVAGQEMHDSGFiTTNVDVYgKQEPWEIYdSgvpCGDDEDNSSYrYFITKLKKKS-NARYHRsVGNKGTWKQDNKG 100 7*********99.899999999998887883566799456***733555333345544424444444444.5677775888****** PP NAM 90 kevlsk......kgel..vglkktLvfykg..rapkgektdWvmheyrl 128 k+v+ k + + +g k++L + ++ ++ + +W+m+ey+l XP_009774958.1 101 KPVHYKnmgnssS--VvnIGSKTSLSYKNKkfYPEDQKDGHWLMKEYEL 147 996655433..156*****95522455566789****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.01E-16	5	168	IPR003441	NAC domain
PROSITE profile	PS51005	22.693	6	170	IPR003441	NAC domain
Pfam	PF02365	1.5E-12	8	147	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence Send to blast
MEHLKFEEGF RFRPTDSEGL TFLLRFVAGQ EMHDSGFITT NVDVYGKQEP WEIYDSGVPC 60 GDDEDNSSYR YFITKLKKKS NARYHRSVGN KGTWKQDNKG KPVHYKNMGN SSSVVNIGSK 120 TSLSYKNKKF YPEDQKDGHW LMKEYELSKV ILHKFDQDRR DYVLCAIKKL KHVNSSSETS 180 TITTLNNVSE GTDEVTSSVD DLLATNNCKG YYNLEHSETL AFQESMVMNN SVFEPLQVVA 240 EPAEFPDYLY QWDGPELNQI LDGVPEVDVA VDIVEPLPAA AEPTEATYTY GQHSVEATAR 300 YDPSMPDMSI NSAHIEHSKV ANMSQMNLMS FDQSVPEDVL GLDPWDIMDS NELNRMLEDV 360 SECCPDGC

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence Send to blast

MEHLKFEEGF RFRPTDSEGL TFLLRFVAGQ EMHDSGFITT NVDVYGKQEP WEIYDSGVPC  60
GDDEDNSSYR YFITKLKKKS NARYHRSVGN KGTWKQDNKG KPVHYKNMGN SSSVVNIGSK  120
TSLSYKNKKF YPEDQKDGHW LMKEYELSKV ILHKFDQDRR DYVLCAIKKL KHVNSSSETS  180
TITTLNNVSE GTDEVTSSVD DLLATNNCKG YYNLEHSETL AFQESMVMNN SVFEPLQVVA  240
EPAEFPDYLY QWDGPELNQI LDGVPEVDVA VDIVEPLPAA AEPTEATYTY GQHSVEATAR  300
YDPSMPDMSI NSAHIEHSKV ANMSQMNLMS FDQSVPEDVL GLDPWDIMDS NELNRMLEDV  360
SECCPDGC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009774958.1	0.0	PREDICTED: protein ATAF2-like
TrEMBL	A0A1U7W8K2	0.0	A0A1U7W8K2_NICSY; protein ATAF2-like
STRING	XP_009774958.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2219	12	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-11	NAC domain containing protein 32