 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009772330.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
HSF |
| Protein Properties |
Length: 200aa MW: 23752.3 Da PI: 9.7569 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009772330.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 110.6 | 1.1e-34 | 31 | 124 | 2 | 102 |
HHHHHHHHHC..TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
HSF_DNA-bind 2 Flkklyeile..deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94
Fl k+y++le +ee+++++sw+ +g+ fvv+ + ef++++LpkyFkh+nf+SFvRQLn+YgFkkv +++ weF+h++Fkkg ++ll
XP_009772330.1 31 FLLKTYDLLEeqEEENNKVVSWNGEGSGFVVWCPAEFSEHMLPKYFKHNNFSSFVRQLNTYGFKKVASKR---------WEFQHDKFKKGCRQLL 116
9********955568999*************************************************999.........**************** PP
XXXXXXXX CS
HSF_DNA-bind 95 ekikrkks 102
e+i rkk
XP_009772330.1 117 EEITRKKC 124
*****986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MATHAIPAPA DDRNISRKIG RSLRTKCPAP FLLKTYDLLE EQEEENNKVV SWNGEGSGFV 60
VWCPAEFSEH MLPKYFKHNN FSSFVRQLNT YGFKKVASKR WEFQHDKFKK GCRQLLEEIT 120
RKKCEPSAFP IYLKPTERNT FAIKEENTTR QLLMEENKNL RKERLELQMQ IAHFQKLEMK 180
LLECLSQYVE NSQNKTRRLF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5hdk_A | 2e-19 | 27 | 122 | 7 | 110 | Heat shock factor protein 2 |
| 5hdk_B | 2e-19 | 27 | 122 | 7 | 110 | Heat shock factor protein 2 |
| 5hdk_C | 2e-19 | 27 | 122 | 7 | 110 | Heat shock factor protein 2 |
| 5hdk_D | 2e-19 | 27 | 122 | 7 | 110 | Heat shock factor protein 2 |
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