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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009771078.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
NAC |
| Protein Properties |
Length: 278aa MW: 30980 Da PI: 7.3878 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009771078.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 94.2 | 2.2e-29 | 11 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLp.k...kvkaeek..ewyfFskrdkkyatgkrknratksgyWkat 86
lppG rF P+de+l+++yL k ++++ +++ + i+e+d+y+++P +Lp + k+ + + +w+ F+ r k +r + gyWk+
XP_009771078.1 11 LPPGTRFYPSDEQLICYYLSLKNSADHrndFQF-NLIREIDLYNFDPFNLPdSacfKYGRGGRkrHWFCFVARVLKG-----GRRRAGGGYWKKR 99
79*****************99987777433333.56**************953666444444412666666655543.....2445689****** PP
NAM 87 gkdkevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128
g+ ++v+ + ++ + g++k++vfy g +++++ktdW+m ey+l
XP_009771078.1 100 GRVRDVMGEgaGTVVAGTRKSFVFYLGdCTKTAVKTDWLMYEYAL 144
********97667779*********884567789*********87 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MGDPNPTSFS LPPGTRFYPS DEQLICYYLS LKNSADHRND FQFNLIREID LYNFDPFNLP 60
DSACFKYGRG GRKRHWFCFV ARVLKGGRRR AGGGYWKKRG RVRDVMGEGA GTVVAGTRKS 120
FVFYLGDCTK TAVKTDWLMY EYALIGNPMA SFVLCRVFIK SRYRNNLSEH VFSSYGEETV 180
AAVRHVGIQC DGTAASVTES KMHDGNTVDQ ENDVSKLQNG IVTNLNGQAL TESVVKQIGL 240
ESDRPPGLNG FSAQELTAIL EGDFIELDDL LCPLPGIN
|
| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-28 | 7 | 161 | 13 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-28 | 7 | 161 | 13 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-28 | 7 | 161 | 13 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-28 | 7 | 161 | 13 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-28 | 7 | 161 | 16 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 2e-28 | 7 | 161 | 16 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 2e-28 | 7 | 161 | 16 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 2e-28 | 7 | 161 | 16 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 2e-28 | 7 | 161 | 16 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 2e-28 | 7 | 161 | 16 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 2e-28 | 7 | 161 | 16 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 2e-28 | 7 | 161 | 16 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-28 | 7 | 161 | 13 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-28 | 7 | 161 | 13 | 166 | NAC domain-containing protein 19 |
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