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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_009767834.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
MYB |
Protein Properties |
Length: 436aa MW: 49703.2 Da PI: 6.6103 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009767834.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.2 | 8e-08 | 2 | 27 | 22 | 48 |
T-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqkyl 48
++W+ Ia+ m gR +kqc++rw+++l
XP_009767834.1 2 RRWAQIAENMV-GRAGKQCRERWHNHL 27
56*********.*************97 PP
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2 | Myb_DNA-binding | 56.4 | 6.8e-18 | 33 | 75 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
++ W++eE++ lv+a+kq G++ W+ Ia++++ gRt++ +k++w+
XP_009767834.1 33 KDTWSEEEELMLVEAHKQIGNK-WAEIAKRIP-GRTENAIKNHWN 75
679*******************.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 436 aa
Download sequence Send
to blast |
MRRWAQIAEN MVGRAGKQCR ERWHNHLRPD IKKDTWSEEE ELMLVEAHKQ IGNKWAEIAK 60 RIPGRTENAI KNHWNATKRR QNSRRNKLKK QEKDGPNESK YRSNILQDYI RSKYFSDDSP 120 LTTTMTPMTN ATPPYSDDDS PSLLTSQTYD EEMNFMQNLF GRNSLMENNG KVLDNNSSSS 180 SYGFNSFGFN YSKNDNQTDN GQDGCNLYLE PNMYMADDQS YNCSDLYLSY LLDRTSTSPT 240 TSLPYSGSFA YGNMMNQASS SSGGNNEVDL MEMFYCLLHS STASFRNSGL LFGGGPKINK 300 DKESDVDYEP PTINTIIPKH MNTVNDFQEK VLGGNHHGFK AWTNGFRRFR KLQHQNLTNG 360 RKWLTNMGGR PRTMDGESSD EAAPLQRKRI SSSAQPDAQL GELQNPTVEE VQALWGEMDL 420 VENMILGFLP PFLSPI
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1mse_C | 4e-34 | 2 | 81 | 25 | 104 | C-Myb DNA-Binding Domain |
1msf_C | 4e-34 | 2 | 81 | 25 | 104 | C-Myb DNA-Binding Domain |