![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009765461.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
WRKY |
Protein Properties |
Length: 327aa MW: 37179.4 Da PI: 4.9732 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009765461.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Nsy&pid=XP_009765461.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 76.6 | 2.8e-24 | 129 | 189 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDg+ WrKYGqK++ ++++pr+YYrCt + gC++ k+v+r +++p + ++Y+g+H+++
XP_009765461.1 129 DDGHVWRKYGQKQILDAPYPRHYYRCTNKfdqGCEAIKQVQRIQDNPPQFRTIYQGHHTCT 189
8**************************99999***************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MESQWQENSL SDLKMLIKEL NCGQEFTHKL RDVIKQSLVN GDMNMLAENL VGQIMGSFCK 60 TLSILNTSNS NEDSQIPMVA VFPCPKDGRT SPEDSTGSCK KSSAKDRIGC NKKRKISAKT 120 VKETSTLADD GHVWRKYGQK QILDAPYPRH YYRCTNKFDQ GCEAIKQVQR IQDNPPQFRT 180 IYQGHHTCTT YPTASQILLD SSTDYENSSI LLSFNTKDNH YYHPYNFPTF FSTKKETKEE 240 NSPSFFYPNN NQNQISTSDY ILPANDYWTP ATETSGNVMA TALSSASDNV DYISSESVTS 300 THNLEMEMEM EMEMMAGIDF DDLPFEF
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3D Structure ? help Back to Top |
![Structure](draw_protein_structure.php?sp=Nsy&pid=XP_009765461.1) |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6ir8_A | 1e-18 | 129 | 188 | 9 | 68 | OsWRKY45 |