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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009765231.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
MYB |
Protein Properties |
Length: 347aa MW: 38694.1 Da PI: 6.4024 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009765231.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46.6 | 8.2e-15 | 36 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l ++ G g+W+ +ar g+ R++k+c++rw +yl
XP_009765231.1 36 KGLWSPEEDEKLMHYMLTNGQGCWSDVARNAGLQRCGKSCRLRWINYL 83
678*******************************************97 PP
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2 | Myb_DNA-binding | 51.7 | 2e-16 | 89 | 133 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+++++E+el+++++ +lG++ W+ Ia +++ gRt++++k++w++
XP_009765231.1 89 RGAFSPQEEELIIHLHSLLGNR-WSQIAGRLP-GRTDNEIKNFWNST 133
89********************.*********.***********986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MRKPEFSSSS SGKNGTNSNN NNNNNNNNNA NVKLRKGLWS PEEDEKLMHY MLTNGQGCWS 60 DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEELI IHLHSLLGNR WSQIAGRLPG 120 RTDNEIKNFW NSTLKKRLKN SSSSSTPSPN ASDSSSEPCK DLNMGVNQGF MSMEKHKLMA 180 MYMDSTSSSS SSMALNTIID PLPTLEHSLM NMPSRFGAPS YLTTQPCMAQ GGNVTNGSLF 240 YGNNHGIFGG NLGIEGEIYV PPLESVSIEY QNVEVGNIVE RRSQNNNPNN NMTNLTSHFN 300 SSSNIKVENF GGIGNYWEGD DLKVGEWDLE ELMKDVSPFP FLDFQIE
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975450 | 1e-136 | HG975450.1 Solanum pennellii chromosome ch11, complete genome. |