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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009764550.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
MYB |
Protein Properties |
Length: 349aa MW: 39401.2 Da PI: 6.046 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009764550.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.9 | 4.8e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEd +++ +v+ +G g+W++++++ g++R++k+c++rw +yl
XP_009764550.1 14 RGPWTAEEDAKILAYVASHGIGNWTLVPQKAGLNRCGKSCRLRWTNYL 61
89********************************************97 PP
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2 | Myb_DNA-binding | 49.8 | 8.1e-16 | 68 | 110 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+++T++E+e +++++k G++ W++Ia+ ++ gRt++++k++w++
XP_009764550.1 68 DNFTPQEEECILELHKTIGSR-WSLIAKQLP-GRTDNDVKNYWNT 110
68*******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MGRPPCCDKA NIKRGPWTAE EDAKILAYVA SHGIGNWTLV PQKAGLNRCG KSCRLRWTNY 60 LRPDLKHDNF TPQEEECILE LHKTIGSRWS LIAKQLPGRT DNDVKNYWNT KLKKKLVNMG 120 IDPVTHKPFA QVFAEYGKIS GLPIQNTRNN ICLPNNTTEI SKQFPFSSGT PHDKFVHNIM 180 NDQLQENYST QKYTWDLKPQ YQVIHEETLQ TNSFSEVSPL ISSATSFNPT VFSSSSSYAS 240 VQSQVHTTAC SSSTSTWNEF VLGDLCTSTD TEQKQEYQLQ AGIYLSKDLS SSVHKDNPTC 300 GEVTEVEEKQ SVEETTCSSA VDSFVDTILA RDKQMLMDFP PLLDLYLDY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975442 | 2e-57 | HG975442.1 Solanum pennellii chromosome ch03, complete genome. |