![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009764184.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
WRKY |
Protein Properties |
Length: 329aa MW: 36676.7 Da PI: 9.9926 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009764184.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Nsy&pid=XP_009764184.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 100.6 | 9.4e-32 | 258 | 315 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+
XP_009764184.1 258 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 315
99************************988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MAVELMMDYR NTRNCTLVTK LEEKTVVEEA SSGLESVEKL IRLLSQTQTQ TQSQQIQQQK 60 QGYLEQKNSP MEIEMVADAA VTKFKKVISL LDRNRTGHAR FRRAPVASSP SQISIKDFVD 120 TKVYSPTPIQ QIPLVSYDNY SQQLSLVPKT ISFSYSPEMS RTNSFNISTL TGETESKQHS 180 SSSAFQITNL SQVSNSAGKP PLSSSSLKRK CSLSENAVSG KCSGSSGRCH CSKRRKLRLK 240 RVVRVPAISM KMADIPPDDY SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVERALDD 300 PTMLIVTYEG EHNHSLSVAE TSSLILESS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ874393 | 0.0 | KJ874393.1 Nicotiana tabacum putative WRKY transcription factor 7 mRNA, complete cds. |