![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009759684.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 436aa MW: 48975.5 Da PI: 7.5216 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009759684.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Nsy&pid=XP_009759684.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 349.2 | 6.6e-107 | 45 | 430 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
l++lLl+cA++ s+g+l+ a+a+L+++ +las +gd+mqRlaa f+ La rl++ ++++ykal+ s + ++ +++ +f +++P+l +++
XP_009759684.1 45 LIQLLLTCANHASTGNLHHADACLSQILQLASITGDSMQRLAAWFASSLAIRLVKRWPGIYKALNHGVPS--RIVDLDQSRIIFAKAFPYLGLAY 137
689*************************************************************887777..37777777888************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+ N+ + +a+++++ +Hi+D++ + W+++l+ + + p+++p+l+iT v++ +k +lee+++r++k A++l+++f+fn l +l +l+
XP_009759684.1 138 AVINRVLIQAMSEDRIIHIVDLGSGDTKLWIPFLKNIVNLPNETPNLKITCVNN----NKAMLEEMASRIKKEAKALDISFQFNSL-NVDLRELT 227
******************************************************....9**************************5.889***** PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrll.................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
l++L+vk gE+la +vl+lh ll +++v+ ++ +e+L ++ slsPkv+++veqeadhn +++++rf+e l+yysalf
XP_009759684.1 228 LDMLKVKAGESLAFVSVLNLHVLLveddrinsqfnlnknnnNNNVKDCKRMSEFLTMLHSLSPKVLILVEQEADHNLSKLVDRFVEGLHYYSALF 322
**************************************98877777777999******************************************* PP
GRAS 269 dsleaklpres....eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
ds+++++ + eer+ vE++ lg+ei+n+vaceg er+erhe+++kW rl++ GF+pv+l ++++++ak+l++ +++dgy++ +++gsl+
XP_009759684.1 323 DSIDTTFKGSNcslcEERVAVEQM-LGKEIENMVACEGLEREERHERFGKWIVRLTRGGFRPVRLWYDIMEDAKRLVEAYGGDGYKIISQKGSLM 416
******998889999*********.********************************************************************** PP
GRAS 360 lgWkdrpLvsvSaW 373
++W+drp++svSaW
XP_009759684.1 417 ICWHDRPIYSVSAW 430
************** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 436 aa
Download sequence Send
to blast |
MNISSPAIKP DVTLSLTLSS STSSTTTTTD ASTDALNPKE RGVKLIQLLL TCANHASTGN 60 LHHADACLSQ ILQLASITGD SMQRLAAWFA SSLAIRLVKR WPGIYKALNH GVPSRIVDLD 120 QSRIIFAKAF PYLGLAYAVI NRVLIQAMSE DRIIHIVDLG SGDTKLWIPF LKNIVNLPNE 180 TPNLKITCVN NNKAMLEEMA SRIKKEAKAL DISFQFNSLN VDLRELTLDM LKVKAGESLA 240 FVSVLNLHVL LVEDDRINSQ FNLNKNNNNN NVKDCKRMSE FLTMLHSLSP KVLILVEQEA 300 DHNLSKLVDR FVEGLHYYSA LFDSIDTTFK GSNCSLCEER VAVEQMLGKE IENMVACEGL 360 EREERHERFG KWIVRLTRGG FRPVRLWYDI MEDAKRLVEA YGGDGYKIIS QKGSLMICWH 420 DRPIYSVSAW NCAFIN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB012639 | 0.0 | AB012639.1 Nicotiana sylvestris Lhcb1*7 gene for light harvesting chlorophyll a/b-binding protein, complete cds. |