PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009632041.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 707aa    MW: 78839.4 Da    PI: 5.4145
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009632041.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822140.81.3e-43702161137
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ggs+r ++ +E+E++k+RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++  s+ + + +++g+ +++ ++ss++
  XP_009632041.1  70 GGSRRCRPLEEKERTKLRERQRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSHSQVTGATGGTPTTMVTSSSSH 164
                     6899*****************************************************************95555554455555544444444433 PP

          DUF822  96 ..........sslkssalaspvesysaspksssfpspssldsislasaasll 137
                               ++ + s ++  ++++++++ks+ +p +s +ds s+a ++++ 
  XP_009632041.1 165 iptqhtppasLKGTPSGFQNTANHSACQMKSVFIPTSSPYDSSSTARSQTSA 216
                     2110000103344557888889999999999999999999999887654443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.8E-3771209IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514453.66E-181253695IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.5E-197256699IPR013781Glycoside hydrolase, catalytic domain
PfamPF013735.2E-107262682IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.2E-70293307IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.2E-70314332IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.2E-70336357IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.7E-8419428IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007506.2E-70429451IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.2E-70502521IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.2E-70536552IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.2E-70553564IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.2E-70571594IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.7E-8574584IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007506.2E-70611633IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.7E-8662676IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008422.7E-8677691IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 707 aa     Download sequence    Send to blast
MASEMQRYVT NEDDEEMDVK EEDDEDEDED DEDKNGTMPA MAGFDGAHGS SSSNMFQHHQ  60
QYQEPPTPCG GSRRCRPLEE KERTKLRERQ RRAITAKILA GLRRHGNYNL RVRADINDVI  120
AALAREAGWV VLPDGTTFPS KSHSQVTGAT GGTPTTMVTS SSSHIPTQHT PPASLKGTPS  180
GFQNTANHSA CQMKSVFIPT SSPYDSSSTA RSQTSAMVAD GQDTQNDPFL VGSGDSIDKQ  240
VIDIHTKLQE RDFAGTPYIP VYVMLPLGVI NMKSELVDAD GLVKQLRVLK STNVDGVMVD  300
CWWGIVEANA PQDYNWNGYK RLFQVVREHK LKIKVVMSFH ECGGNIGDDV CIPLPHWVSE  360
IGRSNPDIYF TDRAGRRNPE CLSWGIDKER VLKGRTAVEV YFDYMRSFRV EFDEFFEDGI  420
ISMVEVGLGP CGELRYPSNP VKHGWRYPGV GEFQCYDQYL LKGLRKAAEA RGHSFWARGP  480
DNAGSYNSQP QETGFFCDGG DYDGYYGRFF LNWYSQVLVD HADRVLSLAK LAFDGTCIAA  540
KLSGIHWWYK TSSHAAELTA GFYNPSNRDG YVAIAAMLKK HGAALNFKCA EMSMLEQAVD  600
FSEALGDPEG LAWQVLNAAW DVSLPVCSEN ALLCHDRGGY NCLLEKAKLL NDPDGKHIFA  660
FTYLRLGPLL IDGQNFMEFE RFVKRMHGEA VLESTVVRES RQSSLCA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1bya_A1e-14925868911444BETA-AMYLASE
1byb_A1e-14925868911444BETA-AMYLASE
1byc_A1e-14925868911444BETA-AMYLASE
1byd_A1e-14925868911444BETA-AMYLASE
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ7183730.0AJ718373.1 Nicotiana tabacum cDNA-AFLP-fragment BSTT43-4-510, cultivar Bright Yellow 2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009632039.10.0PREDICTED: beta-amylase 7-like isoform X1
RefseqXP_009632041.10.0PREDICTED: beta-amylase 7-like isoform X1
RefseqXP_016484151.10.0PREDICTED: beta-amylase 7-like isoform X1
RefseqXP_016484152.10.0PREDICTED: beta-amylase 7-like isoform X1
RefseqXP_018622260.10.0PREDICTED: beta-amylase 7-like isoform X1
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A1S4B5J70.0A0A1S4B5J7_TOBAC; Beta-amylase
STRINGXP_009632039.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]