PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009631312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 232aa MW: 27166.4 Da PI: 6.3592 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 64.2 | 3.9e-20 | 5 | 146 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.........kvkaeekewyfFskrdkkyatgkrknr.atksgyWk 84 + GfrF+Ptd+e + +L + +++++++ + + +++d+y ePw++ + +++ +++ yf +k +kk ++ r+n + ++g Wk XP_009631312.1 5 QEGFRFRPTDSERL-MFLLRFIAKQEMNDSGFiTTNIDVYGReEPWEIYNhgvscgnedNADYSSNYRYFITKLKKK--NKARHNLeVGNKGSWK 96 68**********99.7888888888888778735566**97659****74466544332211122233555554444..45677765788***** PP NAM 85 atgkdkevlsk.....kgelvglkktLvfykg.rapkgektdWvmheyrl 128 ++ k k+v+ k ++ ++g+kk+L + ++ + + + +W+m+ey+l XP_009631312.1 97 QQDKGKSVHYKntgnsSSVVIGCKKSLCYVNKdQCYNQNDGHWLMKEYEL 146 ********999776655566**********66255677799*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-19 | 4 | 169 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.125 | 4 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.4E-14 | 6 | 146 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
MEQLQEGFRF RPTDSERLMF LLRFIAKQEM NDSGFITTNI DVYGREEPWE IYNHGVSCGN 60 EDNADYSSNY RYFITKLKKK NKARHNLEVG NKGSWKQQDK GKSVHYKNTG NSSSVVIGCK 120 KSLCYVNKDQ CYNQNDGHWL MKEYELSNVI LQKFDEDCRD YVLCAIKRKS CSTDYIERPL 180 ARVQYQVNDL GNYMQSNSGH YVESETDMTT QNEVPELEVL DYQLEVLGMK RT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009631313.1 | 1e-175 | PREDICTED: NAC domain-containing protein 78-like | ||||
Refseq | XP_018622015.1 | 1e-175 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1S4AGN1 | 1e-158 | A0A1S4AGN1_TOBAC; NAC domain-containing protein 78-like | ||||
STRING | XP_009631312.1 | 1e-175 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2219 | 12 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 4e-13 | NAC domain containing protein 32 |