 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009630682.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
G2-like |
| Protein Properties |
Length: 420aa MW: 46207.4 Da PI: 7.1117 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009630682.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.6 | 5.2e-32 | 227 | 282 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
XP_009630682.1 227 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 282
68****************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009266 | Biological Process | response to temperature stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0010452 | Biological Process | histone H3-K36 methylation |
| GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
| GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 420 aa
Download sequence Send
to blast |
MMSSPSELSL ECKPHQSYSM LLKSFGEKID QTQNLEEFVA RLEEERVKID AFKRELPLCM 60
QLLTNAMEAS RQQLQSYREN QGRKPVLEEF IPLKNNNASG EGDEKNISNT TDHNKANWMT 120
SAQLWSPGSE EIKEKSTLTS FKETTDMGIS KLALDNNFPS PTLALASTKQ SIGIVEDNKN 180
LETVNNYSGK DNSILEQGKG ASTINLQPDS QSTGAVTNST STQQHRKARR CWSPDLHRRF 240
VNALQMLGGS QVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTRRPSPSP QVATSAPHLV 300
VLGGIWVPPE YAAAAAAHGG APPAATLYGA HPTSHAPSPH YIAAPHGTMA QEFYTTTAPQ 360
HLPSLHHLQH QQLYHHGGQM YNKPPSNSHT HSSPEPESRG TGHGGDRSES IEDGKSESSS
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-14 | 227 | 280 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-14 | 227 | 280 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-14 | 227 | 280 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-14 | 227 | 280 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975524 | 7e-54 | HG975524.1 Solanum lycopersicum chromosome ch12, complete genome. |
