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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009629706.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
HD-ZIP |
Protein Properties |
Length: 212aa MW: 24903.1 Da PI: 5.2731 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009629706.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 62.3 | 7.1e-20 | 49 | 101 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++++eq++ Le+ F k++++ e++ +LA++lgL+ rqV vWFqNrRa++k
XP_009629706.1 49 KRKLSEEQVNLLEQSFGKEHKLESERKDKLASELGLDPRQVAVWFQNRRARWK 101
45899***********************************************9 PP
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2 | HD-ZIP_I/II | 121.8 | 3.5e-39 | 48 | 139 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
+kr+ls+eqv+lLE+sF +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+ktk+lE++y++Lk+++d+ +n+rLe+ev +L+e+l+e
XP_009629706.1 48 RKRKLSEEQVNLLEQSFGKEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKTKKLEEEYSKLKSEHDTNIVHNCRLENEVLKLKEQLSE 139
8****************************************************************************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MNLQVDDQMI LISQYYPGIY TQELPEQGEA KQRRRRKKNK GEASEVMRKR KLSEEQVNLL 60 EQSFGKEHKL ESERKDKLAS ELGLDPRQVA VWFQNRRARW KTKKLEEEYS KLKSEHDTNI 120 VHNCRLENEV LKLKEQLSEA EKEIQRLLME RCDGVNSSNS PTTSSLSMEA ANMEPPFLGE 180 FGMEGFDNTF YVPENTYSQG LEWVNLYMPY DV
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 33 | 50 | RRRKKNKGEASEVMRKRK |
2 | 35 | 50 | RKKNKGEASEVMRKRK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682}. |