 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009628976.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
Trihelix |
Protein Properties |
Length: 291aa MW: 33429.9 Da PI: 5.566 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009628976.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 45.6 | 1.8e-14 | 24 | 114 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+Wt++ + +L++a ++ +l+rg l++++W++v++ + + + +r+ +qCk++++ l+kryk +k+ + + + +s++p+f++l+
XP_009628976.1 24 CWTEEATWTLVDAWGRRYIELNRGFLRQTDWQQVADSVnalhgHTAKTRRTDIQCKNRIDTLKKRYKVEKAKIVESNGTLTSSWPFFERLD 114
8**************************************999999999*******************9999998888788889*****997 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MGEITAPSIQ VTAPSRPLPF REDCWTEEAT WTLVDAWGRR YIELNRGFLR QTDWQQVADS 60 VNALHGHTAK TRRTDIQCKN RIDTLKKRYK VEKAKIVESN GTLTSSWPFF ERLDFLIGNF 120 GNKVTAVMVS PLPLPSRSPP MGVPLPNRRS MTTTTAAPVV TPVVLPQKRQ MPVLDDSYFR 180 RNYSAVAAAA AATAGGEEDY DDEEEEEEEE DMGMSEEKDG MRRLAKAIER FGEIYERVEE 240 MKQRQMVELE KQRMQFAKDL EVQRMQLFMD TQVQLQKIKH TKRSGSDDIY S
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 1e-38 | sequence-specific DNA binding transcription factors |