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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_009628901.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
LBD |
| Protein Properties |
Length: 213aa MW: 23178.2 Da PI: 7.7537 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009628901.1 | genome | NCBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 124.8 | 4.4e-39 | 28 | 128 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+C aCk+lrrkC+++C++apyf ++q +++fa+vhk+FGasn +kll ++p ++r da+ +l+yeA ar+rdP+yG+v++i++lqqq+ +l+ael
XP_009628901.1 28 PCGACKFLRRKCVRGCIFAPYFDSDQgTAHFAAVHKVFGASNASKLLLRIPAHKRLDAVVTLCYEALARVRDPIYGCVAHIFTLQQQVVTLQAEL 122
7***********************9989******************************************************************* PP
DUF260 95 allkee 100
a+++++
XP_009628901.1 123 AYVQAR 128
**9976 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MNGGCGGADR EYNNNNNNNV VGGGGGGPCG ACKFLRRKCV RGCIFAPYFD SDQGTAHFAA 60
VHKVFGASNA SKLLLRIPAH KRLDAVVTLC YEALARVRDP IYGCVAHIFT LQQQVVTLQA 120
ELAYVQARLS TLPHLPMRQS PITPTGLQSS SDIFCTTSSI SSSSNNMEYP QFDITAGLSD 180
SFDEQELENF ELHTLARELV SRHLPGVRFR PSP
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