PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009628603.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 301aa MW: 35001.8 Da PI: 5.0042

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009628603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	76.6	5.9e-24	45	165	6	128
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 +F+P+d +l+++ L k v+gk l++e i vd+y++ePw+L ++ ++k yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++ XP_009628603.1 45 QFRPSDTDLIMQ-LLKFVAGKCLPTEGLIVFVDVYSIEPWQLIGDMS-SKKTHYFLTQLKKKKPTDARFNRTTCNGTWTQQNKGKKILDEdESLI 137 7*******77.667899999999899**********86664.4677899999***************************845556 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g k++L++ ++ ++ + +W+m ey l XP_009628603.1 138 IGYKRSLTYK-HKKDSSFNGRWLMMEYFL 165 9***98.5666668*******76 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	26.78	40	189	IPR003441	NAC domain
SuperFamily	SSF101941	6.8E-24	45	188	IPR003441	NAC domain
Pfam	PF02365	1.2E-10	45	164	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence Send to blast
MFFLVLFHSQ SRKFFVSFSL IQESFLCHCF QSLQERTEPM EKNPQFRPSD TDLIMQLLKF 60 VAGKCLPTEG LIVFVDVYSI EPWQLIGDMS SKKTHYFLTQ LKKKKPTDAR FNRTTCNGTW 120 TQQNKGKKIL DEDESLIIGY KRSLTYKHKK DSSFNGRWLM MEYFLADSLL QELKSNEAKE 180 FVICAIKKNP RSEIRGNSVA SVVEYKRFID RFLQEQSTMI LSDNSPVRLE STSSDVFSMG 240 QLQSKDGVLV IINQTDSDEF FGMVNVENQE CYYQEGDEEE VDWESILDFG DHGSVQNDLL 300 Y

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU753265	0.0	EU753265.1 Nicotiana tabacum NAC transcription factor (NAC8) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009628603.1	0.0	PREDICTED: NAC transcription factor 29-like
Refseq	XP_009628606.1	0.0	PREDICTED: NAC transcription factor 29-like
Refseq	XP_009628607.1	0.0	PREDICTED: NAC transcription factor 29-like
Refseq	XP_018634045.1	0.0	PREDICTED: NAC transcription factor 29-like
Refseq	XP_018634046.1	0.0	PREDICTED: NAC transcription factor 29-like
TrEMBL	A0A1S4CYI5	0.0	A0A1S4CYI5_TOBAC; uncharacterized protein LOC107823995
STRING	XP_009628603.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9815	7	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	2e-15	NAC domain containing protein 47