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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009628417.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
SRS |
| Protein Properties |
Length: 306aa MW: 33627.1 Da PI: 8.6427 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009628417.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 201.1 | 3.3e-62 | 101 | 238 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97
+g+++CqdCGnqakkdC h+RCRtCC+ rgf+C+thvkstWvpaa+rrerqqq + +++kr+r++ + s+l+ t+l++++s
XP_009628417.1 101 QGNVNCQDCGNQAKKDCPHSRCRTCCRGRGFQCQTHVKSTWVPAARRRERQQQFSE-----------NHPKRPRDN--ISGSSLAYTRLPTTSSG 182
7899**********************************************988654...........578999997..67889999999999888 PP
DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
e+ s++P+ev+s+avfrcv+vs+v+d+e+++aYqtav+igGh+fkG+LydqG+++
XP_009628417.1 183 LEVG-SHFPPEVNSPAVFRCVKVSGVEDAEQHYAYQTAVNIGGHIFKGMLYDQGPDQ 238
6665.55************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MSWFFSLGGG KEQEQEELAT NNLLLFKNEA IYNKGFKLWQ QLQQRRPEQN HQNQEQDHVD 60
FSMCVGPASS SKPSNNNSNS SRSLGFRVMN MRGGGSSSGD QGNVNCQDCG NQAKKDCPHS 120
RCRTCCRGRG FQCQTHVKST WVPAARRRER QQQFSENHPK RPRDNISGSS LAYTRLPTTS 180
SGLEVGSHFP PEVNSPAVFR CVKVSGVEDA EQHYAYQTAV NIGGHIFKGM LYDQGPDQSR 240
YSSSGGGAGE SSSQPLNFIA GTTAAASSQQ QQGVSIALFD PASIYPNHHQ LSAFMAGTQF 300
FPPPRP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). Regulates anther dehiscence and floral development. {ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:20706774}. |
