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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009628152.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GATA |
Protein Properties |
Length: 344aa MW: 37402.9 Da PI: 6.313 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009628152.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 52 | 9.6e-17 | 233 | 267 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C + kTp+WR gp g+ktLCnaCG++y++ +l
XP_009628152.1 233 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 267
99*****************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MEASDFFVSG YFSNAGDEQN SNNNNNNFTV DDLLDFSKED EVMTDAFFDS FTGNSADSST 60 VTVVDSCNSS VSGENGHFNG NISCRSFTDA PFPSSELCVP YDDLAELEWL SNFVEESFSS 120 DDVQNLQLIP VTNINSAANN TTDSSSSATT ISAGTNSPPA FPVDTSVPGK ARSKRSRAAP 180 CDWSSRLQLL LSPVTSSSES NDAAANNSTS ATAKATKAPS KKRESIETPG RKCLHCASEK 240 TPQWRTGPMG PKTLCNACGV RYKSGRLVPE YRPAASPTFV SAKHSNSHRK VLELRRQKEF 300 QRHPAHHHQH QLISQTSIFG VSNGGDDFLL HHHQNCGPNF RHLI
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