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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009627108.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 510aa MW: 56373.1 Da PI: 5.1262 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009627108.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 336.9 | 3.6e-103 | 124 | 504 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlar..svselykal.ppsetseknsseelaalklfsevsP 89
lv+lL+++Aea++ +++ la+ +L rl+elasp+g ++m+Rlaa+ft AL+a l + s+s +k++ +p+ ++e+++ ++laa++l++++sP
XP_009627108.1 124 LVHLLMAAAEALTGVNKSreLARVILVRLKELASPNGsTNMERLAAHFTDALQALLDGaaSGSLHAKSMfSPNYKDEQQQGDVLAAFQLLQDMSP 218
68***********85554449****************99*****************994333333344447777888889*************** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
++kf+h+taNqaIleav++++rvHi+D+di++G+QW++L+qaL sR++gpp +lRiT+++++ sg s +++etg+rL+ fA+++g pf+f+
XP_009627108.1 219 FVKFGHFTANQAILEAVAHDRRVHIVDYDIMEGIQWASLMQALLSRKDGPPtpHLRITALSRSGSGrrSFGTVQETGRRLTAFAASIGQPFSFHH 313
***********************************************776556*********888899999************************ PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdslea 273
++ e++++ +L++ +gEa+++n++l+l ++ + ++ ++L+ k+l+P++v++ve+e+ ++e F+ rf+++l++ysal+dslea
XP_009627108.1 314 CRLDSDETFKPPALKLVRGEAIIINCMLHLPHFTYRASDS---VASFLSGSKTLNPRLVTLVEEEVRPieEEEGFVGRFMDTLHHYSALYDSLEA 405
9999****************************98554444...459*******************987778899********************* PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpL 367
++p +s++r+ vEr++lg++i +a + r e+++ ++W e+l+ +G+++ ++s + +qaklll ++ dgyrvee + lvlgWk+r+L
XP_009627108.1 406 GFPLQSRARALVERVFLGPRIIGSLARTYRTRGEDER--SSWGEWLSVVGYHESNISFANHCQAKLLLGLFN-DGYRVEEIgTNKLVLGWKSRRL 497
*******************************999888..99*******************************.******9768999********* PP
GRAS 368 vsvSaWr 374
+s+S W+
XP_009627108.1 498 LSASIWT 504
******6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 510 aa
Download sequence Send
to blast |
MATMMVDGTV PDFDYYSGLS TTTTTTTTTT TTTTTTTTSS SDDDHDHGCT WNDWSPVVDW 60 EAFSGGDNFQ DLIESMIEGN NSSGGLNISI PKSSTFYNSE DSVLMEEPEE SNNNQSEDVN 120 GLKLVHLLMA AAEALTGVNK SRELARVILV RLKELASPNG STNMERLAAH FTDALQALLD 180 GAASGSLHAK SMFSPNYKDE QQQGDVLAAF QLLQDMSPFV KFGHFTANQA ILEAVAHDRR 240 VHIVDYDIME GIQWASLMQA LLSRKDGPPT PHLRITALSR SGSGRRSFGT VQETGRRLTA 300 FAASIGQPFS FHHCRLDSDE TFKPPALKLV RGEAIIINCM LHLPHFTYRA SDSVASFLSG 360 SKTLNPRLVT LVEEEVRPIE EEEGFVGRFM DTLHHYSALY DSLEAGFPLQ SRARALVERV 420 FLGPRIIGSL ARTYRTRGED ERSSWGEWLS VVGYHESNIS FANHCQAKLL LGLFNDGYRV 480 EEIGTNKLVL GWKSRRLLSA SIWTSPDSDL
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |