 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009625983.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
bZIP |
| Protein Properties |
Length: 408aa MW: 42783.9 Da PI: 6.8707 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009625983.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 65.1 | 1.3e-20 | 305 | 367 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L +eN++L+ e+++++ e+++l +++
XP_009625983.1 305 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLREENSSLRAEVNRIRSEYEQLLAQN 367
89*********************************************************9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MGSSEMDKSS KEAKEAKEPK TPNSQAQAST TTAGSVNPDW SGFQAYSPMP PHGFMASSPQ 60
AHPYMWGVQQ FIPPYGTPPH PYVAMYPHGG IYAHPSMPPG SYPFSPFAMP SPNGVAEAAV 120
SNPGNVEVDG KSSEGKEKLP IKRSKGSLGS LNMITGKNNG PGKTSGASAN GVYSKSAESA 180
SEGSSEGSDA NSQNESPMNS GGGQDSADTS QNGNAAHGSQ NGGTGGAPHS MINQTMAIAP 240
ISAAGAGGIP GPTTNLNIGM DYWGAATASS IPAIHGNVPP ASVAGGLVAA GSRDSAQSHM 300
WLQDERELKR QRRKQSNRES ARRSRLRKQA ECDELAQRAE VLREENSSLR AEVNRIRSEY 360
EQLLAQNASL KERLGEVPGE DDPRTSRDDQ LLGKKAQHSA QKESEQGS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 321 | 327 | RRSRLRK |
| 2 | 321 | 328 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 1e-142 | basic region/leucine zipper transcription factor 16 |
