PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009625788.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 576aa    MW: 63492.1 Da    PI: 7.2082
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009625788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.8e-11411469563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  +i+eLe kv++L++e ++L  +l  l+  ++ l+s++
  XP_009625788.1 411 KRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLLQRDSSGLTSQN 469
                     9*************************************************999999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-18407471IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.875409472IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.89E-11411461No hitNo description
Gene3DG3DSA:1.20.5.1705.5E-11411468No hitNo description
PfamPF001706.7E-10411469IPR004827Basic-leucine zipper domain
CDDcd147033.26E-23412461No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MGGESDEANT EMMRRLQSSF GTSSSSLQKP QYILTNQLDI PQLSTSQFHG QMRQFSPNFG  60
VENSTKRVGV SPSHPQMPPI SPYSHIPVSR PTSQQHGMQS FTTQGSSHSR SLSQPSFFSL  120
DSLPPLSPSP YKESLSTFIS DPVAADMSME DRDGNSHSSL PPSPFSRCNS SRAGESLPPR  180
KAHRRSNSDI PFGFSTIMQS SLQLVPSRSP AQLVKREAYW DKSNDKNAEG MGERKFEGEV  240
VDDLFSAYMN LDNIESLNSS GIDEKQGNEN REDLDSRASG TKTNGCDSSD NEATSSVNDS  300
GSSMHTLGMS SSTEKREGIK RSAGGDIAPT VRHYRSVSMD SFMGKLNFGD ESPKLPPSPG  360
PHHGQLSPTN SLDANSDSFS LEFGNGEFNG AELKKIMANE KLAEIALADP KRAKRILANR  420
QSAARSKERK MRYIAELEHK VQTLQTEATT LSAQLTLLQR DSSGLTSQNN ELKFRLQAME  480
QQAHLRDALN EALTAEVQRL KIATAELNGD AAKFQQLSLN PQMFHLQRQQ ATQLSMHQLQ  540
HQQQQQQEKA SSQHQQHAQT KPQQLNSSAP AKHESK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009625788.10.0PREDICTED: probable transcription factor PosF21
RefseqXP_009625795.10.0PREDICTED: probable transcription factor PosF21
RefseqXP_009625801.10.0PREDICTED: probable transcription factor PosF21
TrEMBLA0A1S4CWD20.0A0A1S4CWD2_TOBAC; probable transcription factor PosF21
STRINGXP_009625788.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-149bZIP family protein