 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009625720.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
G2-like |
| Protein Properties |
Length: 398aa MW: 44251.6 Da PI: 9.3446 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009625720.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 104.9 | 4.7e-33 | 257 | 312 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
XP_009625720.1 257 KQRRCWSPELHRRFVDALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 312
79****************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MGSIPPELSL DCRPTFIPTS ITDFLKQLSS IRNVPDKLAQ INDYISRLED EMRKIDAFKR 60
ELPLSVLLVK DAIVALRAES VQCRKSRTEP VLEEFIPLKK SSNEDNKAEV TKDKDSSREK 120
MSWMSSVQLW NSDQTTDEAN NKQRSKLELK IRSPEEGNSS VTEDRFQSCK TLNMGKAFSP 180
FKGYSGFSVT TVKKDDKDEL PGVPGLSLHT PGIIKLREET SGLNSKHNGS RGGLSSVASS 240
QSNIRNGSLS QQQAARKQRR CWSPELHRRF VDALQQLGGS QVATPKQIRE LMQVDGLTND 300
EVKSHLQKYR LHTRRIPNTQ TQPANQSGVA LWMSQDQYGG SSKMSSSQSG SPQGPLHLSG 360
SSRGTSTTVG DSMEEEDDVK SESQSWKNHA HMSGKIDV
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 8e-14 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 8e-14 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 8e-14 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 8e-14 | 257 | 310 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975440 | 4e-80 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
