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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009624576.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
ERF |
Protein Properties |
Length: 377aa MW: 42456.2 Da PI: 4.5126 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009624576.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.5 | 1.9e-19 | 130 | 179 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ kl+g
XP_009624576.1 130 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 179
89*******.**********82....35*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048366 | Biological Process | leaf development |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MDHNILCPIK YTEHKKTIRK VTKPSFVKPK KITETRKSSE YNPTIPRTVR ISITDPDATD 60 SSSDEEELFG RKRVKRYINE ISIETSPIND VKSLNSGKAI KKRAAEASTP KQKALKVKVA 120 QPPPDGTVRK FRGVRQRPWG KWAAEIRDPA RRVRLWLGTY DTAEEAAMVY DNAAIKLRGP 180 DALTNFITPP TKPEEINVAS NSGYESGDES HNLSSPTSVL RFRTSQSSEE AEQQSGSEPI 240 LEEAKGDVCC PLVEEEPVLY SMDNSEQTVE HLECQGETSM IIPDYSHDYL PTDVPFLDDF 300 FNFEAAEQTL FDDTTSFAND LCTSYDDVSS WDFANDLLLD HEIVKFEDSF QDLGALEVDN 360 YFRDIGDFSS VDALMAL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975518 | 3e-31 | HG975518.1 Solanum lycopersicum chromosome ch06, complete genome. |