PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009624566.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 268aa    MW: 30531.2 Da    PI: 7.2356
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009624566.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.7e-13100151255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +  h e+Er+RR+++ + ++ Lr+llP       ++K s ++   +Av+YI +Lq
  XP_009624566.1 100 KIIHREIERQRRQEMSNLYASLRQLLPLeY---LKGKRSTSDHILEAVNYIEHLQ 151
                     5669************************77...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.62E-1597168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.56E-1297155No hitNo description
PROSITE profilePS5088813.74598150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-10101151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.2E-11101167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.4E-6104156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MDNFHSNVPF QQDDDNDHHQ LLYPPTNTNS SSFLYYQENS TQLQDRVTDL TPFHSLEVDS  60
NNVDLNNTNK INKRRKKSQN SSSAVSLQVD ENTADCKQKK IIHREIERQR RQEMSNLYAS  120
LRQLLPLEYL KGKRSTSDHI LEAVNYIEHL QKKVRKMEDN RDKLKKALSS SDVEHPKSGC  180
SSSAAIIITV RLCLDGMEIL TDCSVTNEGF YISRVLEVLL REGLSIVSCS CNKVNGRLLH  240
TIRTEVCSPS SIDAYELQQK LAATVNSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624566.10.0PREDICTED: transcription factor bHLH118-like
TrEMBLA0A1S3XVI90.0A0A1S3XVI9_TOBAC; transcription factor bHLH118-like
STRINGXP_009624566.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12540.14e-27bHLH family protein