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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009624441.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
HD-ZIP |
Protein Properties |
Length: 308aa MW: 34932.8 Da PI: 5.6873 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009624441.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 55.2 | 1.2e-17 | 92 | 145 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
XP_009624441.1 92 KKRRLNLEQVKALERSFEVANKLEPERKIQLARALGLQPRQIAIWFQNRRARWK 145
4557899**********************************************9 PP
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2 | HD-ZIP_I/II | 130.7 | 5.6e-42 | 91 | 182 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ eqvk+LE+sFe +kLeperK +lar+Lglqprq+a+WFqnrRAR+ktkqlE+dye Lkr+ydalk++n++L++++++L++el+
XP_009624441.1 91 EKKRRLNLEQVKALERSFEVANKLEPERKIQLARALGLQPRQIAIWFQNRRARWKTKQLERDYEILKRQYDALKSDNDALKTQNKNLHSELQ 182
69**************************************************************************************9997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MLSGITGIMA FVPSTPEISI NFQDNHIPST SPKVFPSPCN IPHQDFNGVS SMLMRRSMSF 60 SGVERCDNHQ DLRVDDNEMS DDDGSSQLLG EKKRRLNLEQ VKALERSFEV ANKLEPERKI 120 QLARALGLQP RQIAIWFQNR RARWKTKQLE RDYEILKRQY DALKSDNDAL KTQNKNLHSE 180 LQLLTLRNRE SGGGGAPMIN LNKENEGSWS NGSEENNSID VNIGTTTTTR TSSGDSPFYS 240 NNNKNNVFPE SSPIPLAQLF HQSSSRSDLQ CHTIDPTVPD DQGFCNMFAT PVNDQTNFWP 300 WPEQQQFN
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Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 139 | 147 | RRARWKTKQ |