PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009623547.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 284aa MW: 32466.9 Da PI: 5.1313 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 70.9 | 3.2e-22 | 14 | 135 | 6 | 128 |
NAM 6 rFh.PtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 rF+ P+d +l+++ L k v+gk l++e i +diy+ ePw+L ++ ++k yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++ XP_009623547.1 14 RFRpPSDTDLIMQ-LLKFVAGKCLPTEGLIGFADIYSNEPWQLIGDLS-SKKTHYFLTQLKKKKPTDARFNRTTGNGTWTQQNKGKKILDEdDSL 106 676369*****77.667899999999899**************86654.4678899999*******************************85566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g k++L++ ++ ++ + +W+m ey l XP_009623547.1 107 IIGYKRSLTYK-HKKDSSLNGRWLMMEYFL 135 69*******98.5666669*********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 25.538 | 9 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.2E-10 | 14 | 134 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.62E-22 | 15 | 158 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence Send to blast |
MLQERTKPME KIARFRPPSD TDLIMQLLKF VAGKCLPTEG LIGFADIYSN EPWQLIGDLS 60 SKKTHYFLTQ LKKKKPTDAR FNRTTGNGTW TQQNKGKKIL DEDDSLIIGY KRSLTYKHKK 120 DSSLNGRWLM MEYFLAESLL QKLKSKEAKE FVICAIKKNP RSEIRGNSIA TIVEYKRFID 180 RVLQEGVLLQ TSGPSEQSTM ILSENSPVMV ESTSSDGGEF SMGQLVSKDG MLVIVNQTDS 240 DEFFGMVNVE NQERYYQEGD EEEVDWESIL DFGDHGLVQN DLLY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753265 | 0.0 | EU753265.1 Nicotiana tabacum NAC transcription factor (NAC8) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009623547.1 | 0.0 | PREDICTED: NAC transcription factor 56-like | ||||
TrEMBL | A0A1S4B1S6 | 0.0 | A0A1S4B1S6_TOBAC; NAC transcription factor 56-like | ||||
STRING | XP_009623547.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9815 | 7 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10490.1 | 2e-14 | NAC domain containing protein 52 |