 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009622648.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
SRS |
| Protein Properties |
Length: 334aa MW: 36408.2 Da PI: 7.4261 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009622648.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 211.9 | 1.5e-65 | 109 | 253 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskk 98
++sCqdCGnqakkdC+h+RCRtCCksrg++C+thv+stWvpaakrre+qqq a++++++ ++++++kr +++ + s+l +t l+s+++
XP_009622648.1 109 AGISCQDCGNQAKKDCQHMRCRTCCKSRGLQCQTHVRSTWVPAAKRREKQQQIASLQQQQH--RDNNSPKRLKDD--PSGSSLVCTGLPSNTTG- 198
4689**************************************************9977664..466667777766..7889999***9999755. PP
DUF702 99 eletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
le+ ++P++v+s+avf++vr+ss++++e+++aYqtav+igGh+fkGiLydqGle+
XP_009622648.1 199 -LEVGNFPSKVNSTAVFHRVRMSSIEENEDQIAYQTAVNIGGHIFKGILYDQGLES 253
.89999***********************************************997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MAGFFSLGGG RETSQEQHHQ ETTNHHNPES NWFLYRNHDQ ELPAYKGFEL WQQQQQQDEQ 60
QNYQIRNPII NPLQDLYPTS AIGLGVGPTA TDHGASRSAA FIMMRSSGAG ISCQDCGNQA 120
KKDCQHMRCR TCCKSRGLQC QTHVRSTWVP AAKRREKQQQ IASLQQQQHR DNNSPKRLKD 180
DPSGSSLVCT GLPSNTTGLE VGNFPSKVNS TAVFHRVRMS SIEENEDQIA YQTAVNIGGH 240
IFKGILYDQG LESQYNMNAT TGDSSSGGEP VVPHQHKLIG TVTSAATSNA AAGGGAAVAA 300
GEGSHFLEHS IYSAPLINTF MAAGTHFFPP PARS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975514 | 1e-67 | HG975514.1 Solanum lycopersicum chromosome ch02, complete genome. |
| GenBank | KC331910 | 1e-67 | KC331910.1 Solanum lycopersicum expression of terpenoids 1 mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G66350.1 | 2e-65 | Lateral root primordium (LRP) protein-related |
