PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009622624.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 476aa MW: 54466.1 Da PI: 4.3306

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009622624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	57.7	4.2e-18	11	155	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekew......yfFskrdkkyatgkrknr..atksgyW 83 G+rF+Ptd+elv ++L + v++++l+ + +i+ d+yk ePw + e++w yf ++r+k ++ r +r + g+W XP_009622624.1 11 EGYRFRPTDSELV-KFLLRFVAKQELHDNGFIAMYDVYKQEPWVTYShghstgG---VEDNWdtsiyrYFITPRKK---NKGRFSRivGKRGGTW 98 69*********.99999999999999899********99633443331...2223333443344444444...34577773224599 PP NAM 84 katgkdkevlsk......kgelvglkktLvfykgrapkge......ktdWvmheyrl 128 k++ k ++v+ k ++ +g k++ + +++++k +W+m+ey l XP_009622624.1 99 KQQDKGRAVTIKscderkRDLIIGRMKSMCYTEKNNNKCInsddynDGKWLMKEYVL 155 *******9988765444444******76666654223333678****87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.58E-20	3	177	IPR003441	NAC domain
PROSITE profile	PS51005	23.72	9	179	IPR003441	NAC domain
Pfam	PF02365	1.1E-13	12	155	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence Send to blast
MNMMELDNLG EGYRFRPTDS ELVKFLLRFV AKQELHDNGF IAMYDVYKQE PWVTYSHGHS 60 TGGVEDNWDT SIYRYFITPR KKNKGRFSRI VGKRGGTWKQ QDKGRAVTIK SCDERKRDLI 120 IGRMKSMCYT EKNNNKCINS DDYNDGKWLM KEYVLSDPIL NKFSNSERKD YVICAIKKLP 180 KRSTTCNFSQ TSNVTTTMES CSEQEKVDTE VTSDINNYVD QPLMDQDYFV EKAIVESVEP 240 LMVETVGINS VKPLMDQEYT EMITPIYYVE EPMEESKVQS HEATGVENGS SLGLTTFSQF 300 QESMIADFEN AMQEFNVPEI MVRSDENMGC DTLLEKIQTQ DQEEEGCSFA VNEEHNIAFM 360 ESEVKATSFL ELLTGCRGYG MGNNQVQLVP DQSTTITTTM PQFLESWDRF YESSMSMSLV 420 PESTTMLNSN EIATGECDXT GECDTTPCSI IIIGYPLSRM TIYPSDFLCL AMIPYF

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence Send to blast

MNMMELDNLG EGYRFRPTDS ELVKFLLRFV AKQELHDNGF IAMYDVYKQE PWVTYSHGHS  60
TGGVEDNWDT SIYRYFITPR KKNKGRFSRI VGKRGGTWKQ QDKGRAVTIK SCDERKRDLI  120
IGRMKSMCYT EKNNNKCINS DDYNDGKWLM KEYVLSDPIL NKFSNSERKD YVICAIKKLP  180
KRSTTCNFSQ TSNVTTTMES CSEQEKVDTE VTSDINNYVD QPLMDQDYFV EKAIVESVEP  240
LMVETVGINS VKPLMDQEYT EMITPIYYVE EPMEESKVQS HEATGVENGS SLGLTTFSQF  300
QESMIADFEN AMQEFNVPEI MVRSDENMGC DTLLEKIQTQ DQEEEGCSFA VNEEHNIAFM  360
ESEVKATSFL ELLTGCRGYG MGNNQVQLVP DQSTTITTTM PQFLESWDRF YESSMSMSLV  420
PESTTMLNSN EIATGECDXT GECDTTPCSI IIIGYPLSRM TIYPSDFLCL AMIPYF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009622624.1	0.0	PREDICTED: uncharacterized protein LOC104113990
TrEMBL	A0A1J6IJZ5	0.0	A0A1J6IJZ5_NICAT; Uncharacterized protein
STRING	XP_009622624.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15008	4	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	3e-12	NAC domain containing protein 47