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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009621830.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
Trihelix |
| Protein Properties |
Length: 431aa MW: 49255.8 Da PI: 8.4462 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009621830.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 92.2 | 5.2e-29 | 107 | 192 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW++qe+l+L+e+r++++++++++++k+plW+ vs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ ++++yf+qlea
XP_009621830.1 107 RWPRQETLTLLEVRSQLDSKFKEANQKGPLWDGVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRYFRQLEA 192
8*************************************999*****************************98..55667*******85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 431 aa
Download sequence Send
to blast |
MDDHEYGMMD LTQYLNGRPI FSSNIQPHLQ SDFLCNHQHY EMVMATTVPQ HDNCLPHPTA 60
TATARPSVSG GGGGGGVTFS TASEMEGCGG GGGGGAMRGG GDGGNGRWPR QETLTLLEVR 120
SQLDSKFKEA NQKGPLWDGV SRIMSEEHGY QRSGKKCREK FENLYKYYKK TKEGKAGRQD 180
GKHYRYFRQL EALYGKTSNT ISISETNNIG SSNFHYNAIN NNNQEAHNFH PEGPKLSDSL 240
NNLSDSSDSD HATSSDDSEL NTDNDLKKKR KKRRGKRSWK ATIRDFVDIQ MKKLIEKQEA 300
WLEKMMKTIE HKEQERILRE EEWRKQESIR IENEQKFWAG ERAWIQARDT ALIDALRKLS 360
GDQELIKSNK NASICKDMNW DDINRIKCNK KQKENSLSSY YNFKNNEEGR SYCETSRHVP 420
NVHQMMDPGM F
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 267 | 271 | KKRKK |
| 2 | 267 | 273 | KKRKKRR |
| 3 | 268 | 276 | KRKKRRGKR |
| 4 | 269 | 276 | RKKRRGKR |
| 5 | 270 | 275 | KKRRGK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}. |
