PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009621726.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 368aa    MW: 41916.9 Da    PI: 4.4447
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009621726.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.41.4e-1981482128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknr.atksgyWkatgk 88 
                       GfrF+Ptd+e +  +L + v+gk+++ + +  ++vd+y k ePw++  +   + + e+++ y +F+++ kk+ ++ r +r + ++g+Wk+  k
  XP_009621726.1   8 EDGFRFRPTDSEGL-MFLLRFVAGKEMHDSGFiTTNVDVYgKQEPWEIYdNgvpCGDDEDNSSYrYFITKLKKK-SNARYHRaVENKGTWKQDAK 100
                     57**********99.7999999999988878835667*99456*****74455533334554442444444444.45788884677********* PP

             NAM  89 dkevlsk......kgel..vglkktLvfykg..rapkgektdWvmheyrl 128
                     dk+v+ k      +  +  +g k+ L + ++    ++ +  +W+m+ey+l
  XP_009621726.1 101 DKPVHYKnmgntsS--VvnIGSKTCLSYKNKkfYPEDQKDGHWLMKEYEL 148
                     *****996655433..156*********95522455566789******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-175169IPR003441NAC domain
PROSITE profilePS5100522.7657171IPR003441NAC domain
PfamPF023654.1E-129148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MDQHLKLEDG FRFRPTDSEG LMFLLRFVAG KEMHDSGFIT TNVDVYGKQE PWEIYDNGVP  60
CGDDEDNSSY RYFITKLKKK SNARYHRAVE NKGTWKQDAK DKPVHYKNMG NTSSVVNIGS  120
KTCLSYKNKK FYPEDQKDGH WLMKEYELSK VILHKFDQDC RDYVLCAIKK LMYVNSSSET  180
STITALNNTS DGTDEVTSSV DGLLATNNCR NYYNYMCKNL EHSETMAFQE SMVMNNSVVE  240
PLQVVAEPYA PDDLYQWGGK ELDELNQILD GVPEVDVAVD IVEPLAAAAE PTDAAYTCGQ  300
HSVEATTMLN FDQSVLPDMR SNYSEVADHM TYMSQINSKK VPEDVLGLDP WDIMNSDELN  360
RILEDVYI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774958.10.0PREDICTED: protein ATAF2-like
TrEMBLA0A1U7W8K20.0A0A1U7W8K2_NICSY; protein ATAF2-like
STRINGXP_009621726.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-11NAC domain containing protein 32