PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009621726.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 368aa MW: 41916.9 Da PI: 4.4447 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62.4 | 1.4e-19 | 8 | 148 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknr.atksgyWkatgk 88 GfrF+Ptd+e + +L + v+gk+++ + + ++vd+y k ePw++ + + + e+++ y +F+++ kk+ ++ r +r + ++g+Wk+ k XP_009621726.1 8 EDGFRFRPTDSEGL-MFLLRFVAGKEMHDSGFiTTNVDVYgKQEPWEIYdNgvpCGDDEDNSSYrYFITKLKKK-SNARYHRaVENKGTWKQDAK 100 57**********99.7999999999988878835667*99456*****74455533334554442444444444.45788884677********* PP NAM 89 dkevlsk......kgel..vglkktLvfykg..rapkgektdWvmheyrl 128 dk+v+ k + + +g k+ L + ++ ++ + +W+m+ey+l XP_009621726.1 101 DKPVHYKnmgntsS--VvnIGSKTCLSYKNKkfYPEDQKDGHWLMKEYEL 148 *****996655433..156*********95522455566789******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.79E-17 | 5 | 169 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.765 | 7 | 171 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.1E-12 | 9 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence Send to blast |
MDQHLKLEDG FRFRPTDSEG LMFLLRFVAG KEMHDSGFIT TNVDVYGKQE PWEIYDNGVP 60 CGDDEDNSSY RYFITKLKKK SNARYHRAVE NKGTWKQDAK DKPVHYKNMG NTSSVVNIGS 120 KTCLSYKNKK FYPEDQKDGH WLMKEYELSK VILHKFDQDC RDYVLCAIKK LMYVNSSSET 180 STITALNNTS DGTDEVTSSV DGLLATNNCR NYYNYMCKNL EHSETMAFQE SMVMNNSVVE 240 PLQVVAEPYA PDDLYQWGGK ELDELNQILD GVPEVDVAVD IVEPLAAAAE PTDAAYTCGQ 300 HSVEATTMLN FDQSVLPDMR SNYSEVADHM TYMSQINSKK VPEDVLGLDP WDIMNSDELN 360 RILEDVYI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009774958.1 | 0.0 | PREDICTED: protein ATAF2-like | ||||
TrEMBL | A0A1U7W8K2 | 0.0 | A0A1U7W8K2_NICSY; protein ATAF2-like | ||||
STRING | XP_009621726.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2219 | 12 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 1e-11 | NAC domain containing protein 32 |