PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_009621054.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 278aa MW: 31560 Da PI: 5.5882

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009621054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.7	1.8e-11	162	218	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++ +r+++NRe+ArrsR RK++ +e+L++ + +aeN++L +++ + +++ ++ XP_009621054.1 162 RKRKRMISNRESARRSRIRKEKHLENLRNQANRHKAENRDLTNRVHLVTSHCQLVQR 218 5789***********************************************995554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	9.588	160	206	IPR004827	Basic-leucine zipper domain
SMART	SM00338	3.5E-6	161	222	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.8E-8	162	216	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.7E-8	162	214	No hit	No description
SuperFamily	SSF57959	6.43E-10	162	213	No hit	No description
CDD	cd14702	1.65E-19	163	214	No hit	No description
PROSITE pattern	PS00036	0	165	180	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence Send to blast
MLSTFPAIIL SSDGTFPSQF SSFYDGFFPL NCLESTFIFS EQMVELTFQT PTLESVIFHS 60 GSGSDNSKPD SPNSSFGSDE SNMNNHSPWE CLESAFTLPE QGVDSVFTPK QSPTPEPVIS 120 NCGSGPDKYI TDSPNSSSGS DELNMNNDSP NSGSDILFIN ERKRKRMISN RESARRSRIR 180 KEKHLENLRN QANRHKAENR DLTNRVHLVT SHCQLVQRNN EMLRTELVLL QQRLESIREI 240 LLAQQLQQQL YNSSAWPCNN YVEQTPQIIT NQPIIYHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	174	181	RRSRIRKE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009621054.1	0.0	PREDICTED: G-box-binding factor 1-like
Refseq	XP_016476398.1	0.0	PREDICTED: G-box-binding factor 1-like
TrEMBL	A0A1S4AIZ7	0.0	A0A1S4AIZ7_TOBAC; G-box-binding factor 1-like
STRING	XP_009621054.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2820	22	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.2	4e-21	basic leucine-zipper 6