 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009620219.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
B3 |
Protein Properties |
Length: 234aa MW: 26819.9 Da PI: 10.1138 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009620219.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 58.6 | 1.2e-18 | 133 | 216 | 4 | 95 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
++ps+v+ +l lp +f++++ ++++ t+tl de+g++W + +k++ l++GWk+F+ +++L +gD +vF+l++ ++f +
XP_009620219.1 133 SMLPSHVSGGFWLGLPSNFCRKNL--PRRDDTITLIDETGEEWPTVYLAQKNG----LSGGWKKFAVDHDLADGDAIVFHLIRPTKF--KAY 216
689*****************9995..346679***************555555....9***********************997777..444 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MVMSKVKYEE LRQQRLEENK KRMEELNLPL LTQALKISSS PKPSPMKKVK PRIIRTELVS 60 VRRSPRVANK PAPEFKEVIY YERVMIPRRM STPRKRDSSN MVYATDEERA ASIEKAEKLE 120 ASLGPDYPIL VRSMLPSHVS GGFWLGLPSN FCRKNLPRRD DTITLIDETG EEWPTVYLAQ 180 KNGLSGGWKK FAVDHDLADG DAIVFHLIRP TKFKAYIIRV NNVSESESTE TSTN
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975443 | 2e-62 | HG975443.1 Solanum pennellii chromosome ch04, complete genome. |