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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009619351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Trihelix | ||||||||
Protein Properties | Length: 326aa MW: 36180.4 Da PI: 5.9651 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 87.6 | 1.4e-27 | 39 | 133 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++r e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e + ++es+s +++ ++l+ XP_009619351.1 39 RWTRQEILVLIQGKRVAENRVRRGRtaglelgsgQVEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDFKKIKEWECGIKEESESFWVMRNDLR 133 8**********************97778888888**********************************************9999999*9999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.4 | 39 | 105 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 1.4E-11 | 39 | 128 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 7.4E-5 | 39 | 104 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0050777 | Biological Process | negative regulation of immune response | ||||
GO:0071219 | Biological Process | cellular response to molecule of bacterial origin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MALEPLTLAP APFDGDSNGG RQQSVNGADD GNRAPRLPRW TRQEILVLIQ GKRVAENRVR 60 RGRTAGLELG SGQVEPKWAS VSSYCKKHGV NRGPVQCRKR WSNLAGDFKK IKEWECGIKE 120 ESESFWVMRN DLRRERKLPG FFDREVYQIL DRGSGGEEIE EGLALALAPA AAVNEPEALF 180 DSGRSAAADE GLFSDFEQSE AGDKDKHMPI PAPTPISEQQ YQPLPMECHA QGINHQKEPT 240 SNPDGGSAQE GKKRKRGVTD TDEEADNLQH QLAKALERNG NLLSSQLEAQ NAHYQLDREQ 300 RKDHVNSLVA VLDKLADAMV RIADKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 250 | 256 | GKKRKRG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00288 | DAP | Transfer from AT2G33550 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009619351.1 | 0.0 | PREDICTED: trihelix transcription factor ASR3 isoform X1 | ||||
Swissprot | Q8VZ20 | 1e-114 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | A0A1S4BWA6 | 0.0 | A0A1S4BWA6_TOBAC; trihelix transcription factor ASR3-like isoform X1 | ||||
STRING | XP_009619351.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1786 | 24 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-113 | Trihelix family protein |
Publications ? help Back to Top | |||
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