PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009618980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 306aa MW: 35129.6 Da PI: 9.7522 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.3 | 4.3e-21 | 5 | 126 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 ++F+ +d +l+++ L k ++gk l++e i vdiy+ ePw+L +++ +k yf s+ +kk++t+ r +r+t +g W ++ k k++l++ ++ XP_009618980.1 5 VQFRLSDTNLIMQ-LLKFLAGKCLPTEGLIGFVDIYSKEPWQLIGDISS-KKTHYFLSQLKKKKPTDARFKRTTGNGSWTQQNKGKKILDEdGSL 97 78999******77.567888999999899**************866644.57789999********************************94555 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g k++L + ++ ++ + +W+m ey l XP_009618980.1 98 IIGYKRSLSYK-HKKDSSLNGRWLMMEYFL 126 69*******98.5666669*********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 25.484 | 1 | 150 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.5E-9 | 4 | 125 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-21 | 6 | 149 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
MEKNVQFRLS DTNLIMQLLK FLAGKCLPTE GLIGFVDIYS KEPWQLIGDI SSKKTHYFLS 60 QLKKKKPTDA RFKRTTGNGS WTQQNKGKKI LDEDGSLIIG YKRSLSYKHK KDSSLNGRWL 120 MMEYFLADSL LQELKSNEAK EFVICAIKKN PRSEIRENTD ATIVEYKRFI DRVLQEGVHL 180 QTSEPSQQSI MILSKNSPMM SESTSSDVLS MGQLEQNNGM LVQTDSDEFF GILNVQNQEC 240 YYQEARNRKT TASAISLELE LMVSYLMVVF KISSSLTKHC LHLMVLRKME KFAASLTSKR 300 LRQFLG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753265 | 0.0 | EU753265.1 Nicotiana tabacum NAC transcription factor (NAC8) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009618980.2 | 0.0 | PREDICTED: uncharacterized protein LOC104111082, partial | ||||
TrEMBL | A0A1S3ZA51 | 1e-177 | A0A1S3ZA51_TOBAC; uncharacterized protein LOC107784474 | ||||
STRING | XP_009618980.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9815 | 7 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 2e-14 | NAC domain containing protein 96 |