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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009618151.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
WOX |
Protein Properties |
Length: 226aa MW: 25918.7 Da PI: 9.8138 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009618151.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 60.3 | 3e-19 | 11 | 72 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r +R+++ +eql Lee+++k r+p+a++++ ++++l +++ ++V++WFqN++a++++
XP_009618151.1 11 RPTRWSPAPEQLMFLEEMYRKgLRNPNATQIQNITAHLssygKIEGKNVFYWFQNHKARDRQ 72
569*****************99*************************************996 PP
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2 | Wus_type_Homeobox | 112.2 | 2.8e-36 | 13 | 73 | 4 | 64 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
tRW+P peQ++ Lee+y++Glr+Pn+ +iq+ita+L++yGkie+kNVfyWFQN+kaR+rqk
XP_009618151.1 13 TRWSPAPEQLMFLEEMYRKGLRNPNATQIQNITAHLSSYGKIEGKNVFYWFQNHKARDRQK 73
8***********************************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MSFLKREKMT RPTRWSPAPE QLMFLEEMYR KGLRNPNATQ IQNITAHLSS YGKIEGKNVF 60 YWFQNHKARD RQKLKKKLLA QMNQQQFFSQ YPVDAHSTTT TSTNTNNLFH CPTDHYSHNS 120 SSVVNQICPI SSSGLLQEGG IKDESSRVMT YLYPMDISRP VENIENCMIR PYGKDWVLMM 180 NISPNTLPCI NKPLKTLPLF PITETNGLKE QISTKSASTL SLSFSS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ628172 | 1e-102 | FJ628172.1 Petunia x hybrida cultivar W138 WOX3 protein mRNA, complete cds. |