PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_009617897.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 132aa MW: 14973.5 Da PI: 7.9551

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009617897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00065	2	18	39	55
TCHHHHHHHHHHHHHHH CS HLH 39 sKaeiLekAveYIksLq 55 +Ka+iLe+A+ I++L+ XP_009617897.1 2 DKASILERATSLIRQLR 18 8**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence Send to blast
MDKASILERA TSLIRQLRER PETVLQCHLE TKTNNEKGAP AVKKARISLP EVEVRSLEEE 60 VLITVYCKKK YTGIIDEILS VIQKLHLTIK SSNFMPFGST AMHITVIGQM NDELCETTDC 120 LAEKLRQSIL KM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009617897.1	8e-93	PREDICTED: uncharacterized protein LOC104110157
Refseq	XP_016491406.1	8e-93	PREDICTED: uncharacterized protein LOC107811069
TrEMBL	A0A1S4BRB0	2e-91	A0A1S4BRB0_TOBAC; uncharacterized protein LOC107811069
STRING	XP_009617897.1	3e-92	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA14501	9	10