PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009617646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 221aa MW: 24617.5 Da PI: 5.9568 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 29.7 | 1.4e-09 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m++kgLtl+h+kSHLQkYRl XP_009617646.1 1 MGLKGLTLYHLKSHLQKYRL 20 899****************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.0E-8 | 1 | 21 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 1.0E-21 | 66 | 112 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MGLKGLTLYH LKSHLQKYRL GQQAKKQNAA EENRENIGES CGQFSLHSSG PSSTSSSMNS 60 MRGEVPISQA LMCQIEVQNR LHEQLEVQQK LQMRIEAQGK YLQAIMDRAH KSLSTDMNSP 120 SSVEATSQLT DFNLALSSLM DCMHGDNRDE TVAGKRTDDD TNKALPTSTY LREEEQKNNV 180 NIKLEEASIS FDLNSRSSYD FIGMNSAALE AKPLSNGRLE I |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009617645.1 | 1e-162 | PREDICTED: myb family transcription factor PHL11-like | ||||
Refseq | XP_016440239.1 | 1e-162 | PREDICTED: myb family transcription factor APL-like | ||||
TrEMBL | A0A1S3XK76 | 1e-161 | A0A1S3XK76_TOBAC; myb family transcription factor APL-like | ||||
STRING | XP_009617645.1 | 1e-162 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 2e-46 | G2-like family protein |