PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009617292.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 321aa    MW: 37115.5 Da    PI: 5.1422
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009617292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.44.7e-22121313121
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     +G+rFhPtd el+ ++Lk+ ++g++l+ e  ++++diy    Pw++  +  ++eek  yfF++ +k++++ +r +r+ ++g+Wk +    ++++ 
  XP_009617292.1  12 MGVRFHPTDAELI-NFLKRFLKGETLSSEYPFQHADIYGDrPPWEIFgADSNSEEKVRYFFTRLKKQKSEHTRVRRTCANGTWKGQTGIVPITNG 105
                     7************.9**********999778*******87478***755666677788**************************88888*****9 PP

             NAM  96 kgelvglkktLvfykgrapkgektdW 121
                     kg++vg ++ + f+  ++++ ++  W
  XP_009617292.1 106 KGTVVGFRRNFKFHCRSKQREHNKIW 131
                     **************777766666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.16110159IPR003441NAC domain
SuperFamilySSF1019413.79E-2310158IPR003441NAC domain
PfamPF023655.6E-1212131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MSTLPAARRR IMGVRFHPTD AELINFLKRF LKGETLSSEY PFQHADIYGD RPPWEIFGAD  60
SNSEEKVRYF FTRLKKQKSE HTRVRRTCAN GTWKGQTGIV PITNGKGTVV GFRRNFKFHC  120
RSKQREHNKI WLEYFVGDDF FRENNIPKED IVVCRIKKNI REKIVRDDAV SMDEQELAQI  180
IKAMLHGPDD DYCTLQPATV CQGNETHNEF IENTMLHAEY APDDYLSGLN YQNSQLLINS  240
DEGNQVTIWG NQNNMMAMLT EDATTNLTTL EQEAYDQLLT AEIEQGHGAD HQTNNSEFWE  300
AMNGILEGVN IDVPYDWLHD L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532580.0EU753258.1 Nicotiana tabacum NAC transcription factor (NAC1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009617292.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A314L5J40.0A0A314L5J4_NICAT; Nac domain-containing protein 78
STRINGXP_009617292.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-14NAC domain containing protein 2