PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009617292.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 321aa MW: 37115.5 Da PI: 5.1422 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 70.4 | 4.7e-22 | 12 | 131 | 3 | 121 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +G+rFhPtd el+ ++Lk+ ++g++l+ e ++++diy Pw++ + ++eek yfF++ +k++++ +r +r+ ++g+Wk + ++++ XP_009617292.1 12 MGVRFHPTDAELI-NFLKRFLKGETLSSEYPFQHADIYGDrPPWEIFgADSNSEEKVRYFFTRLKKQKSEHTRVRRTCANGTWKGQTGIVPITNG 105 7************.9**********999778*******87478***755666677788**************************88888*****9 PP NAM 96 kgelvglkktLvfykgrapkgektdW 121 kg++vg ++ + f+ ++++ ++ W XP_009617292.1 106 KGTVVGFRRNFKFHCRSKQREHNKIW 131 **************777766666666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.161 | 10 | 159 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.79E-23 | 10 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.6E-12 | 12 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MSTLPAARRR IMGVRFHPTD AELINFLKRF LKGETLSSEY PFQHADIYGD RPPWEIFGAD 60 SNSEEKVRYF FTRLKKQKSE HTRVRRTCAN GTWKGQTGIV PITNGKGTVV GFRRNFKFHC 120 RSKQREHNKI WLEYFVGDDF FRENNIPKED IVVCRIKKNI REKIVRDDAV SMDEQELAQI 180 IKAMLHGPDD DYCTLQPATV CQGNETHNEF IENTMLHAEY APDDYLSGLN YQNSQLLINS 240 DEGNQVTIWG NQNNMMAMLT EDATTNLTTL EQEAYDQLLT AEIEQGHGAD HQTNNSEFWE 300 AMNGILEGVN IDVPYDWLHD L |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753258 | 0.0 | EU753258.1 Nicotiana tabacum NAC transcription factor (NAC1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009617292.1 | 0.0 | PREDICTED: NAC transcription factor 29-like | ||||
TrEMBL | A0A314L5J4 | 0.0 | A0A314L5J4_NICAT; Nac domain-containing protein 78 | ||||
STRING | XP_009617292.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 7e-14 | NAC domain containing protein 2 |