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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009617147.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
B3 |
Protein Properties |
Length: 427aa MW: 47347.5 Da PI: 8.2456 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009617147.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 98.3 | 4.9e-31 | 84 | 189 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.S CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.s 88
f+kv tpsdv+k++rlv+pk++ae++ +++ +++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+
XP_009617147.1 84 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldsSSNDKGGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGaGElV 178
89****************************955666889*************************************************6657777 PP
EE..EEEEE-S CS
B3 89 efelvvkvfrk 99
+ +l++ ++r+
XP_009617147.1 179 KHRLFIDWRRR 189
88888888876 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MNFFTNRRGI QQQAAGSSKG MCPFSQSSSS SSTSSSQQQQ QQQHRESTEL LLMDSSPTAT 60 RNYGDGDEVA GGEAHHLIER EHMFDKVVTP SDVGKLNRLV IPKQHAEKYF PLDSSSNDKG 120 GLLLNFEDRN GKPWRFRYSY WNSSQSYVMT KGWSRFVKEK KLDAGDIVSF QRGAGELVKH 180 RLFIDWRRRP DAPDMNPFMV PHHFSNWNHG RLFLQRGPPA PSFTQQHPHS QYSHNLLLEA 240 GSNIAQQQQS HHYPHSYIYG IGNTSPAYYN TCFNNSSIST NATVVNANPC AGGSGNYARS 300 GATASQLISQ HELEIMQMQR GCSSVGGSSG GEPMVFNSVP VVQGKVAAKR LRLFGVNMDC 360 PMDHSDMFSS STIPTTYSNA PHFSSSLSTS STPFLQLRNF NSPLQVVPSD EESSDKGKAS 420 MSLDLDI
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 5e-62 | 77 | 190 | 1 | 114 | B3 domain-containing transcription factor NGA1 |
5os9_B | 5e-62 | 77 | 190 | 1 | 114 | B3 domain-containing transcription factor NGA1 |
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