PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009617136.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 351aa    MW: 40051.1 Da    PI: 5.0671
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009617136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.2e-112823221055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rrRR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_009617136.1 282 RRRREKINERLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 322
                     9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.301272321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-14275338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-13277335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-12278327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.20E-11281326No hitNo description
PfamPF000103.1E-8282322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MESVGTFFDE ECQSLSRMFF TENSDFLFQL QCDHPSALTW HDQEANKNVT DNTNIEGSFY  60
SSPSHTFNSN IKYFSQENSN DSRGSDGMFF LNNTSHEYLQ HYNGVTNLLQ VTNNHPDEST  120
DFYMMGHKNL ENSSVNPAFQ DDDFMKEMVS LKDDIGKEML LKRKLHEVEL QSVAEDQKLE  180
ETKNPKKSKV SREGPKNKKS AQPKVKKNQK NIQINNEEVG DQQETSNAAN CKSGQSISSC  240
SSEEDSNASQ ELNTNSDTKS NFNSKTRASR GTATDPQSLY ARRRREKINE RLKILQNLVP  300
NGTKVDISTM LEEAVQYVKF LQLQIKLLSS DDMWMYAPIA YNGMEMDLSH T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1281286RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009617136.10.0PREDICTED: transcription factor bHLH84-like
TrEMBLA0A1S3Y8130.0A0A1S3Y813_TOBAC; transcription factor bHLH84-like
STRINGXP_009617136.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.16e-52bHLH family protein