PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009617116.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 128aa    MW: 14086.8 Da    PI: 4.2952
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009617116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.30.000157431954
                    HHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 19 afeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    +++ L ++l +  s ++s+ ++Ka+i  +A +YI +L
  XP_009617116.1  7 KIALLNQHLEQlGSITNSPSVNKASIIVHASKYIEEL 43
                    78888888888655677777**************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.25E-51058IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-41155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MGSKDQKIAL LNQHLEQLGS ITNSPSVNKA SIIVHASKYI EELKERIDKL NEDVSTSQPS  60
HVDDENSLPL VTVETLEKGF LINVFSEKNC PGLLVSILEA FEELGLELSD ARVSCSDSFR  120
LEAVSENT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009617116.11e-87PREDICTED: transcription factor bHLH61-like isoform X2
TrEMBLA0A1S3ZCI78e-86A0A1S3ZCI7_TOBAC; transcription factor bHLH61-like isoform X2
STRINGXP_009617115.11e-85(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10570.13e-07bHLH family protein