PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009616457.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 227aa    MW: 25441.1 Da    PI: 9.5796
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009616457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.9e-123889154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    ++ +hn+ Er RR+  Ns  + Lr+llP  +   + kKls  +++ ++++YI +L
  XP_009616457.1 38 KKLNHNASERDRRKVFNSLCSSLRSLLPAtD---HTKKLSFPATVARVIKYIPDL 89
                    6789*************************55...7777**************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.6013789IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1237106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1138103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-93889IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-64395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MMAVSSPLFS NFGVCLADPK NQEVNTIEAP VSRDGTVKKL NHNASERDRR KVFNSLCSSL  60
RSLLPATDHT KKLSFPATVA RVIKYIPDLK KDVERLTQKK EDLTLRSIPK KEYSADFNKQ  120
TIRGGIQSSL SVISANQVGN REVIIHISTL KINKSSFAEA VSELEDEGLL LLNASSFETL  180
GDRVFYNLHF QAQGTLPINV QILRDKLLSY YEKEDKLLPP WISGFST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009616456.11e-142PREDICTED: transcription factor ORG2-like
TrEMBLA0A1S3WY531e-139A0A1S3WY53_TOBAC; transcription factor ORG2-like
STRINGXP_009616456.11e-141(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-47bHLH family protein