PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009615661.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 365aa    MW: 41044.4 Da    PI: 4.4433
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009615661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.22.5e-1321248128
             NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgel 99 
                     +P ++e v+ +L k v g ++++ + i+ v++y   +P++L ++++ ++++ y F++ +k++a+ k+ +r  +   g Wk   k+k+v++kkg++
  XP_009615661.1   2 EPYNDEHVMSHLLKFVCGIPMRC-HPIPLVELYGNdKPSQLFQHLD-TTTNDYVFTQLKKTSARCKNFRRsiVGGGGSWKVLDKSKPVFDKKGSV 94 
                     688999999*************9.78*****997648****75553.45678******99999999999942344899***************** PP

             NAM 100 vglkktLvfykg.rapkgektdWvmheyrl 128
                     +g kk++ f +  ++ + ++  W m+ey+l
  XP_009615661.1  95 IGFKKSFRFDDInDHCSDSRIIWSMKEYSL 124
                     *********964266677899*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.2721151IPR003441NAC domain
PfamPF023658.9E-63124IPR003441NAC domain
SuperFamilySSF1019411.02E-163150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MEPYNDEHVM SHLLKFVCGI PMRCHPIPLV ELYGNDKPSQ LFQHLDTTTN DYVFTQLKKT  60
SARCKNFRRS IVGGGGSWKV LDKSKPVFDK KGSVIGFKKS FRFDDINDHC SDSRIIWSMK  120
EYSLNDTIVK VLRQRRQICY EDYVLCRITK TVNLCASSQN VPLAISGENS VANVMSEEPL  180
MLGHLNHLNY VPSSCLSQDQ EKASLISWAP SPVNQFQFQE NQDSELSINL LNGNDEYISL  240
VGLLTEETSA ATLSQLPLIS TEEAECSAAV EPTYTSLPPF SEPFEPLTEE ELAFFDKLMD  300
QETASVCAKE GPNNDIASYH KELDAYAAAI LELNPPLVPD IPQYLEDQCP LFSEDFYIGP  360
TALWS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615661.10.0PREDICTED: uncharacterized protein LOC104108353
STRINGXP_009615661.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1802124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G60350.12e-07NAC domain containing protein 24