PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009615661.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 365aa MW: 41044.4 Da PI: 4.4433 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 42.2 | 2.5e-13 | 2 | 124 | 8 | 128 |
NAM 8 hPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgel 99 +P ++e v+ +L k v g ++++ + i+ v++y +P++L ++++ ++++ y F++ +k++a+ k+ +r + g Wk k+k+v++kkg++ XP_009615661.1 2 EPYNDEHVMSHLLKFVCGIPMRC-HPIPLVELYGNdKPSQLFQHLD-TTTNDYVFTQLKKTSARCKNFRRsiVGGGGSWKVLDKSKPVFDKKGSV 94 688999999*************9.78*****997648****75553.45678******99999999999942344899***************** PP NAM 100 vglkktLvfykg.rapkgektdWvmheyrl 128 +g kk++ f + ++ + ++ W m+ey+l XP_009615661.1 95 IGFKKSFRFDDInDHCSDSRIIWSMKEYSL 124 *********964266677899*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 19.272 | 1 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.9E-6 | 3 | 124 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.02E-16 | 3 | 150 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence Send to blast |
MEPYNDEHVM SHLLKFVCGI PMRCHPIPLV ELYGNDKPSQ LFQHLDTTTN DYVFTQLKKT 60 SARCKNFRRS IVGGGGSWKV LDKSKPVFDK KGSVIGFKKS FRFDDINDHC SDSRIIWSMK 120 EYSLNDTIVK VLRQRRQICY EDYVLCRITK TVNLCASSQN VPLAISGENS VANVMSEEPL 180 MLGHLNHLNY VPSSCLSQDQ EKASLISWAP SPVNQFQFQE NQDSELSINL LNGNDEYISL 240 VGLLTEETSA ATLSQLPLIS TEEAECSAAV EPTYTSLPPF SEPFEPLTEE ELAFFDKLMD 300 QETASVCAKE GPNNDIASYH KELDAYAAAI LELNPPLVPD IPQYLEDQCP LFSEDFYIGP 360 TALWS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009615661.1 | 0.0 | PREDICTED: uncharacterized protein LOC104108353 | ||||
STRING | XP_009615661.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18021 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G60350.1 | 2e-07 | NAC domain containing protein 24 |